RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 OSBPL9Q96SU4 736 aa26.73■■□□□ 1.87
DNMT3A-206ENST00000406659 KIAA1586Q9HCI6 787 aa26.73■■□□□ 1.87
DNMT3A-206ENST00000406659 TMEM8AQ9HCN3 771 aa26.73■■□□□ 1.87
DNMT3A-206ENST00000406659 ZNF446Q9NWS9 450 aa26.73■■□□□ 1.87
DNMT3A-206ENST00000406659 INTUQ9ULD6 942 aa26.73■■□□□ 1.87
DNMT3A-206ENST00000406659 PPME1Q9Y570 386 aa26.73■■□□□ 1.87
DNMT3A-206ENST00000406659 LOC102724159A0A0B4J2E5 919 aa26.72■■□□□ 1.87
DNMT3A-206ENST00000406659 K7ERI5 159 aa26.72■■□□□ 1.87
DNMT3A-206ENST00000406659 RHOXF2BP0C7M4 288 aa26.72■■□□□ 1.87
DNMT3A-206ENST00000406659 KIF22Q14807 665 aa26.72■■□□□ 1.87
DNMT3A-206ENST00000406659 PWP2Q15269 919 aaKnown RBP26.72■■□□□ 1.87
DNMT3A-206ENST00000406659 MAP1SQ66K74 1059 aaPredicted RBP26.72■■□□□ 1.87
DNMT3A-206ENST00000406659 DHX37Q8IY37 1157 aaKnown RBP26.72■■□□□ 1.87
DNMT3A-206ENST00000406659 NOA1Q8NC60 698 aaKnown RBP26.72■■□□□ 1.87
DNMT3A-206ENST00000406659 SLC30A5Q8TAD4 765 aa26.72■■□□□ 1.87
DNMT3A-206ENST00000406659 KCNN1Q92952 543 aa26.72■■□□□ 1.87
DNMT3A-206ENST00000406659 GPR20Q99678 358 aa26.72■■□□□ 1.87
DNMT3A-206ENST00000406659 RHOXF2Q9BQY4 288 aa26.72■■□□□ 1.87
DNMT3A-206ENST00000406659 FAM213AQ9BRX8 229 aa26.72■■□□□ 1.87
DNMT3A-206ENST00000406659 ZNF233A6NK53 670 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 NCK2O43639 380 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 LRRN2O75325 713 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 CETPP11597 493 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 TNFAIP3P21580 790 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 CCNA1P78396 465 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 ENPEPQ07075 957 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 NFRKBQ6P4R8 1299 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 FBXO16Q8IX29 292 aaPredicted RBP26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 GPRC5AQ8NFJ5 357 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 LNX1Q8TBB1 728 aaPredicted RBP26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 MORC4Q8TE76 937 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 POP1Q99575 1024 aaKnown RBP26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 EFCC1Q9HA90 598 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 PCDHGC5Q9Y5F6 944 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 ASB14A6NK59 587 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 EXTL3O43909 919 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 MAFO75444 373 aaPredicted RBP26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 BRD3Q15059 726 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 GLYCTKQ8IVS8 523 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 TLR10Q9BXR5 811 aa26.71■■□□□ 1.87
DNMT3A-206ENST00000406659 ZNFX1Q9P2E3 1918 aaKnown RBP26.7■■□□□ 1.86
DNMT3A-206ENST00000406659 KIAA0391O15091 583 aaKnown RBP26.7■■□□□ 1.86
DNMT3A-206ENST00000406659 LGR5O75473 907 aa26.7■■□□□ 1.86
DNMT3A-206ENST00000406659 POTEJP0CG39 1038 aa26.7■■□□□ 1.86
DNMT3A-206ENST00000406659 NOP2P46087 812 aaKnown RBP26.7■■□□□ 1.86
DNMT3A-206ENST00000406659 CREG2Q8IUH2 290 aa26.7■■□□□ 1.86
DNMT3A-206ENST00000406659 BBXQ8WY36 941 aaPredicted RBP26.7■■□□□ 1.86
DNMT3A-206ENST00000406659 SPATA33Q96N06 139 aa26.7■■□□□ 1.86
DNMT3A-206ENST00000406659 OGFRQ9NZT2 677 aa26.7■■□□□ 1.86
DNMT3A-206ENST00000406659 COQ4Q9Y3A0 265 aa26.7■■□□□ 1.86
DNMT3A-206ENST00000406659 PDHXO00330 501 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 DLATP10515 647 aaKnown RBP26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 GTF2A2P52657 109 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 HSDL1Q3SXM5 330 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 SLFN12LQ6IEE8 588 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 CCDC62Q6P9F0 684 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 COG1Q8WTW3 980 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 SYT11Q9BT88 431 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 TOPORSQ9NS56 1045 aaPredicted RBP26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 STYXL1Q9Y6J8 313 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 SPDYE4A6NLX3 237 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 PDE2AO00408 941 aaPredicted RBP26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 FTCDO95954 541 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 PIGRP01833 764 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 TXNP10599 105 aaKnown RBP26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 MARK3P27448 753 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 MFAP3P55082 362 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 PLPPR4Q7Z2D5 763 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 DNAAF5Q86Y56 855 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 EXOC8Q8IYI6 725 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 FBXL13Q8NEE6 735 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 SEMA4DQ92854 862 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 TMEM134Q9H6X4 195 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 ARFGAP3Q9NP61 516 aa26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 AGO2Q9UKV8 859 aaKnown RBP26.69■■□□□ 1.86
DNMT3A-206ENST00000406659 GRID2IPA4D2P6 1211 aa26.68■■□□□ 1.86
DNMT3A-206ENST00000406659 TUBBP07437 444 aa26.68■■□□□ 1.86
DNMT3A-206ENST00000406659 GPC3P51654 580 aa26.68■■□□□ 1.86
DNMT3A-206ENST00000406659 TTLL4Q14679 1199 aa26.68■■□□□ 1.86
DNMT3A-206ENST00000406659 CCDC181Q5TID7 509 aa26.68■■□□□ 1.86
DNMT3A-206ENST00000406659 CC2D1AQ6P1N0 951 aaPredicted RBP26.68■■□□□ 1.86
DNMT3A-206ENST00000406659 PPM1KQ8N3J5 372 aa26.68■■□□□ 1.86
DNMT3A-206ENST00000406659 PSMB7Q99436 277 aa26.68■■□□□ 1.86
DNMT3A-206ENST00000406659 AGPAT1Q99943 283 aa26.68■■□□□ 1.86
DNMT3A-206ENST00000406659 SEPT11Q9NVA2 429 aaKnown RBP26.68■■□□□ 1.86
DNMT3A-206ENST00000406659 RAB21Q9UL25 225 aa26.68■■□□□ 1.86
DNMT3A-206ENST00000406659 SLC45A1Q9Y2W3 748 aa26.68■■□□□ 1.86
DNMT3A-206ENST00000406659 A0A0A6YYK5 440 aaPredicted RBP26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 CCL15-CCL14A0A0B4J2E2 113 aa26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 CCDC151A5D8V7 595 aa26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 CXCR5P32302 372 aa26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 USP8P40818 1118 aa26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 MATR3P43243 847 aaKnown RBP eCLIP26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 CCL15Q16663 113 aa26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 MEI1Q5TIA1 1274 aa26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 IER5Q5VY09 327 aa26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 OLIG1Q8TAK6 271 aa26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 ATP8B4Q8TF62 1192 aa26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 MS4A4AQ96JQ5 239 aa26.67■■□□□ 1.86
DNMT3A-206ENST00000406659 NT5C1BQ96P26 610 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms