RNA–Protein interactions for RNA: ENST00000406396.7

KDSR-202, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDSR, Length 5,447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-202ENST00000406396 CDR2Q01850 454 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 MKRN3Q13064 507 aaKnown RBP18.41■□□□□ 0.54
KDSR-202ENST00000406396 PDIA2Q13087 525 aaKnown RBP18.41■□□□□ 0.54
KDSR-202ENST00000406396 KCNB1Q14721 858 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 ANKRD40Q6AI12 368 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 ZBED8Q8IZ13 594 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 CCZ1BP86790 482 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 CCZ1P86791 482 aaPredicted RBP18.41■□□□□ 0.54
KDSR-202ENST00000406396 KRT76Q01546 638 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 TMEM259Q4ZIN3 620 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 AMACRQ9UHK6 382 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 KRT14P02533 472 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 COPS2P61201 443 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 STAG2Q8N3U4 1231 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 BTBD6Q96KE9 485 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 ECT2Q9H8V3 914 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 LRFN2Q9ULH4 789 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 PDHA1P08559 390 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 GNA15P30679 374 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 PAPOLAP51003 745 aaKnown RBP18.41■□□□□ 0.54
KDSR-202ENST00000406396 SPDYE1Q8NFV5 336 aaPredicted RBP18.41■□□□□ 0.54
KDSR-202ENST00000406396 LRRC1Q9BTT6 524 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 EDEM3Q9BZQ6 932 aa18.41■□□□□ 0.54
KDSR-202ENST00000406396 TBXAS1P24557 533 aaPredicted RBP18.4■□□□□ 0.54
KDSR-202ENST00000406396 EXOSC10Q01780 885 aaKnown RBP18.4■□□□□ 0.54
KDSR-202ENST00000406396 GUCY1A3Q02108 690 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 NKX1-1Q15270 411 aaPredicted RBP18.4■□□□□ 0.54
KDSR-202ENST00000406396 QRICH1Q2TAL8 776 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 ZNF568Q3ZCX4 644 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 KIAA1841Q6NSI8 718 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 TBC1D16Q8TBP0 767 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 ABCF3Q9NUQ8 709 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 IP6K2Q9UHH9 426 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 SNX12Q9UMY4 172 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 ZHX2Q9Y6X8 837 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 IQCA1LA6NCM1 817 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 P4HBP07237 508 aaKnown RBP18.4■□□□□ 0.54
KDSR-202ENST00000406396 CHRNA5P30532 468 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 RHOT1Q8IXI2 618 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 RAVER2Q9HCJ3 691 aaKnown RBP18.4■□□□□ 0.54
KDSR-202ENST00000406396 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.4■□□□□ 0.54
KDSR-202ENST00000406396 PFASO15067 1338 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 DHX34Q14147 1143 aaKnown RBP18.4■□□□□ 0.54
KDSR-202ENST00000406396 C1orf54Q8WWF1 131 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 FAM167AQ96KS9 214 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 GTSE1Q9NYZ3 720 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 A0A1B0GTH6 734 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 QARSP47897 775 aaKnown RBP18.4■□□□□ 0.54
KDSR-202ENST00000406396 SCARF1Q14162 830 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 RGS9BPQ6ZS82 235 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 SAAL1Q96ER3 474 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 PXDNLA1KZ92 1463 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 HABP4Q5JVS0 413 aaKnown RBP18.4■□□□□ 0.54
KDSR-202ENST00000406396 PARP9Q8IXQ6 854 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 ADGRF4Q8IZF3 695 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 ZNRF3Q9ULT6 936 aa18.4■□□□□ 0.54
KDSR-202ENST00000406396 PYGBP11216 843 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 SDC4P31431 198 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 STXBP2Q15833 593 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 RNPC3Q96LT9 517 aaKnown RBP18.39■□□□□ 0.53
KDSR-202ENST00000406396 KRT7P08729 469 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 IZUMO3Q5VZ72 239 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 ATP11CQ8NB49 1132 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 SCG3Q8WXD2 468 aaKnown RBP18.39■□□□□ 0.53
KDSR-202ENST00000406396 FAM161BQ96MY7 647 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 CHP1Q99653 195 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 SUCLA2Q9P2R7 463 aaPredicted RBP18.39■□□□□ 0.53
KDSR-202ENST00000406396 MYBL1P10243 752 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 KCNJ6P48051 423 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 PSMC1P62191 440 aaKnown RBP18.39■□□□□ 0.53
KDSR-202ENST00000406396 ZBTB41Q5SVQ8 909 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 NOP9Q86U38 636 aaKnown RBP18.39■□□□□ 0.53
KDSR-202ENST00000406396 CEP70Q8NHQ1 597 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 ZBTB18Q99592 522 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 LXNQ9BS40 222 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 ZNF185O15231 689 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 GGPS1O95749 300 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 FMR1Q06787 632 aaKnown RBP eCLIP18.39■□□□□ 0.53
KDSR-202ENST00000406396 NCAPHQ15003 741 aa18.39■□□□□ 0.53
KDSR-202ENST00000406396 PNPLA7Q6ZV29 1317 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 EMSYQ7Z589 1322 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 M0QYV0 167 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 ORC4O43929 436 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 CHGBP05060 677 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 ATG9AQ7Z3C6 839 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 YIPF3Q9GZM5 350 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 CFAP73A6NFT4 308 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 DIAPH2O60879 1101 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 GPC3P51654 580 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 TNFAIP2Q03169 654 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 FRMD5Q7Z6J6 570 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 FAM167BQ9BTA0 163 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 FSD1LQ9BXM9 530 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 SLC9A2Q9UBY0 812 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 HERC5Q9UII4 1024 aaKnown RBP18.38■□□□□ 0.53
KDSR-202ENST00000406396 TRIM33Q9UPN9 1127 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 IQSEC2Q5JU85 1478 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 STRIP1Q5VSL9 837 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 TRPV6Q9H1D0 765 aa18.38■□□□□ 0.53
KDSR-202ENST00000406396 SMARCA1P28370 1054 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms