RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 GLUD1P00367 558 aa23.51■■□□□ 1.35
RHBDD3-202ENST00000406335 SOD2P04179 222 aa23.51■■□□□ 1.35
RHBDD3-202ENST00000406335 XBP1P17861 261 aa23.51■■□□□ 1.35
RHBDD3-202ENST00000406335 CYP3A7P24462 503 aa23.51■■□□□ 1.35
RHBDD3-202ENST00000406335 NPEPPSP55786 919 aa23.51■■□□□ 1.35
RHBDD3-202ENST00000406335 NCBP1Q09161 790 aaKnown RBP23.51■■□□□ 1.35
RHBDD3-202ENST00000406335 RSAD2Q8WXG1 361 aa23.51■■□□□ 1.35
RHBDD3-202ENST00000406335 RPS6KC1Q96S38 1066 aa23.51■■□□□ 1.35
RHBDD3-202ENST00000406335 HINFPQ9BQA5 517 aa23.51■■□□□ 1.35
RHBDD3-202ENST00000406335 IFT122Q9HBG6 1241 aa23.51■■□□□ 1.35
RHBDD3-202ENST00000406335 BMP2KQ9NSY1 1161 aaPredicted RBP23.51■■□□□ 1.35
RHBDD3-202ENST00000406335 WNT16Q9UBV4 365 aa23.51■■□□□ 1.35
RHBDD3-202ENST00000406335 CA14Q9ULX7 337 aa23.51■■□□□ 1.35
RHBDD3-202ENST00000406335 B4GALT3O60512 393 aa23.5■■□□□ 1.35
RHBDD3-202ENST00000406335 QARSP47897 775 aaKnown RBP23.5■■□□□ 1.35
RHBDD3-202ENST00000406335 AFF1P51825 1210 aaKnown RBP23.5■■□□□ 1.35
RHBDD3-202ENST00000406335 FOSBP53539 338 aa23.5■■□□□ 1.35
RHBDD3-202ENST00000406335 EARS2Q5JPH6 523 aaKnown RBP23.5■■□□□ 1.35
RHBDD3-202ENST00000406335 SPECC1Q5M775 1068 aa23.5■■□□□ 1.35
RHBDD3-202ENST00000406335 MRPL10Q7Z7H8 261 aaKnown RBP23.5■■□□□ 1.35
RHBDD3-202ENST00000406335 CNNM3Q8NE01 707 aa23.5■■□□□ 1.35
RHBDD3-202ENST00000406335 SMG7Q92540 1137 aaKnown RBP23.5■■□□□ 1.35
RHBDD3-202ENST00000406335 MBOAT7Q96N66 472 aa23.5■■□□□ 1.35
RHBDD3-202ENST00000406335 CCDC194A0A1B0GVG4 234 aa23.49■■□□□ 1.35
RHBDD3-202ENST00000406335 TEX28O15482 410 aa23.49■■□□□ 1.35
RHBDD3-202ENST00000406335 LILRB3O75022 631 aa23.49■■□□□ 1.35
RHBDD3-202ENST00000406335 SPATA31D3P0C874 917 aa23.49■■□□□ 1.35
RHBDD3-202ENST00000406335 GLUD2P49448 558 aa23.49■■□□□ 1.35
RHBDD3-202ENST00000406335 SPATA31D4Q6ZUB0 917 aa23.49■■□□□ 1.35
RHBDD3-202ENST00000406335 TAS1R1Q7RTX1 841 aa23.49■■□□□ 1.35
RHBDD3-202ENST00000406335 CMASQ8NFW8 434 aaPredicted RBP23.49■■□□□ 1.35
RHBDD3-202ENST00000406335 WASF1Q92558 559 aa23.49■■□□□ 1.35
RHBDD3-202ENST00000406335 HERC2P3Q9BVR0 1158 aa23.49■■□□□ 1.35
RHBDD3-202ENST00000406335 WDR6Q9NNW5 1121 aaKnown RBP23.49■■□□□ 1.35
RHBDD3-202ENST00000406335 FAM205CA6NFA0 338 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 SLC37A4O43826 429 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 LMNAP02545 664 aaKnown RBP23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 LAMTOR4Q0VGL1 99 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 MOXD1Q6UVY6 613 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 CYP26C1Q6V0L0 522 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 PIK3AP1Q6ZUJ8 805 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 OTUD6AQ7L8S5 288 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 PALB2Q86YC2 1186 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 SLC44A3Q8N4M1 653 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 RNF149Q8NC42 400 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 ETNPPLQ8TBG4 499 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 TCP11Q8WWU5 503 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 RIN2Q8WYP3 895 aaPredicted RBP23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 APOL6Q9BWW8 343 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 LIMCH1Q9UPQ0 1083 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 CLUHO75153 1309 aa23.48■■□□□ 1.35
RHBDD3-202ENST00000406335 PLXNA3P51805 1871 aa23.47■■□□□ 1.35
RHBDD3-202ENST00000406335 GAS2O43903 313 aaKnown RBP23.47■■□□□ 1.35
RHBDD3-202ENST00000406335 RFPL2O75678 378 aa23.47■■□□□ 1.35
RHBDD3-202ENST00000406335 P4HBP07237 508 aaKnown RBP23.47■■□□□ 1.35
RHBDD3-202ENST00000406335 NCLP19338 710 aaKnown RBP23.47■■□□□ 1.35
RHBDD3-202ENST00000406335 RFC5P40937 340 aa23.47■■□□□ 1.35
RHBDD3-202ENST00000406335 NR5A1Q13285 461 aa23.47■■□□□ 1.35
RHBDD3-202ENST00000406335 CCDC83Q8IWF9 413 aa23.47■■□□□ 1.35
RHBDD3-202ENST00000406335 COLEC11Q9BWP8 271 aa23.47■■□□□ 1.35
RHBDD3-202ENST00000406335 TRIM6Q9C030 488 aaPredicted RBP23.47■■□□□ 1.35
RHBDD3-202ENST00000406335 SEMA4AQ9H3S1 761 aa23.47■■□□□ 1.35
RHBDD3-202ENST00000406335 CFAP54Q96N23 3096 aa23.47■■□□□ 1.35
RHBDD3-202ENST00000406335 EML1O00423 815 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 ASAP2O43150 1006 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 HOXA11P31270 313 aaPredicted RBP23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 UBXN11Q5T124 520 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 ARID2Q68CP9 1835 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 B3GNT9Q6UX72 402 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 NEK8Q86SG6 692 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 GLYCTKQ8IVS8 523 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 COLGALT2Q8IYK4 626 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 HACE1Q8IYU2 909 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 ZNF579Q8NAF0 562 aaKnown RBP23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 NXPE3Q969Y0 559 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 GAD1Q99259 594 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 MINDY3Q9H8M7 445 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 TBC1D17Q9HA65 648 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 PPME1Q9Y570 386 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 IPPQ9Y573 584 aa23.46■■□□□ 1.35
RHBDD3-202ENST00000406335 KRBA1A5PL33 1030 aa23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 ARL5CA6NH57 179 aa23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 N4BP1O75113 896 aaKnown RBP23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 SRFP11831 508 aa23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 KRT2P35908 639 aa23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 MLH1P40692 756 aa23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 XKR9Q5GH70 373 aa23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 GET4Q7L5D6 327 aaPredicted RBP23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 TNFRSF25Q93038 417 aa23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 MYADMQ96S97 322 aa23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 MARCH5Q9NX47 278 aa23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 EPS15L1Q9UBC2 864 aa23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 SIT1Q9Y3P8 196 aa23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 R4GN57 208 aa23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 MYO10Q9HD67 2058 aa23.45■■□□□ 1.34
RHBDD3-202ENST00000406335 YWHABP31946 246 aaKnown RBP23.44■■□□□ 1.34
RHBDD3-202ENST00000406335 RBM25P49756 843 aaKnown RBP23.44■■□□□ 1.34
RHBDD3-202ENST00000406335 KIAA0319Q5VV43 1072 aa23.44■■□□□ 1.34
RHBDD3-202ENST00000406335 NOTUMQ6P988 496 aa23.44■■□□□ 1.34
RHBDD3-202ENST00000406335 KIAA2013Q8IYS2 634 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms