RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ESYT2A0FGR8 921 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 PDXKO00764 312 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 ZBTB5O15062 677 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 SGPL1O95470 568 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 PSMC2P35998 433 aaKnown RBP10.27□□□□□ -0.77
SMC1B-202ENST00000404354 RAD23BP54727 409 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 KRT17Q04695 432 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 C4orf33Q8N1A6 199 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 PPM1KQ8N3J5 372 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 EIF1ADQ8N9N8 165 aaKnown RBP10.27□□□□□ -0.77
SMC1B-202ENST00000404354 TTC8Q8TAM2 541 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 CCDC127Q96BQ5 260 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 SAAL1Q96ER3 474 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 NAP1L3Q99457 506 aaPredicted RBP10.27□□□□□ -0.77
SMC1B-202ENST00000404354 PITPNM3Q9BZ71 974 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 C12orf65Q9H3J6 166 aaKnown RBP10.27□□□□□ -0.77
SMC1B-202ENST00000404354 BTNL10A8MVZ5 291 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 CYP26A1O43174 497 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 ENTPD5O75356 428 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 COILP38432 576 aaPredicted RBP10.27□□□□□ -0.77
SMC1B-202ENST00000404354 ADCY8P40145 1251 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 TUBP50607 506 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 ECHDC2Q86YB7 292 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 ZNF483Q8TF39 744 aaPredicted RBP10.27□□□□□ -0.77
SMC1B-202ENST00000404354 P3H4Q92791 437 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 CENPTQ96BT3 561 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 AGPAT1Q99943 283 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 STK33Q9BYT3 514 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 CD209Q9NNX6 404 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.27□□□□□ -0.77
SMC1B-202ENST00000404354 MYO3BQ8WXR4 1341 aa10.27□□□□□ -0.77
SMC1B-202ENST00000404354 RHBDL3P58872 404 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 MYL7Q01449 175 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 SEPT2Q15019 361 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 SGO2Q562F6 1265 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 ODR4Q5SWX8 454 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 RNF207Q6ZRF8 634 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 ZNF804AQ7Z570 1209 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 COL23A1Q86Y22 540 aaPredicted RBP10.26□□□□□ -0.77
SMC1B-202ENST00000404354 OLIG1Q8TAK6 271 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 MAGEC3Q8TD91 643 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 PCDHB18PQ96TA0 734 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 PIDD1Q9HB75 910 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 KLHL11Q9NVR0 708 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 SLC5A4Q9NY91 659 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 TTC7AQ9ULT0 858 aaPredicted RBP10.26□□□□□ -0.77
SMC1B-202ENST00000404354 SUGT1Q9Y2Z0 365 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 ANKRD62A6NC57 917 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 CFAP73A6NFT4 308 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 BHMG1C9JSJ3 638 aaPredicted RBP10.26□□□□□ -0.77
SMC1B-202ENST00000404354 HIP1RO75146 1068 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 TTLL1O95922 423 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 FOXN2P32314 431 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 GPSM2P81274 684 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 BNIP1Q12981 228 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 NBPF20Q3BBV1 942 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 ASPRV1Q53RT3 343 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 INTS8Q75QN2 995 aaKnown RBP10.26□□□□□ -0.77
SMC1B-202ENST00000404354 ZFPM1Q8IX07 1006 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 FAM178BQ8IXR5 827 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 SYT2Q8N9I0 419 aaPredicted RBP10.26□□□□□ -0.77
SMC1B-202ENST00000404354 GPR88Q9GZN0 384 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 MYLK2Q9H1R3 596 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 TAOK3Q9H2K8 898 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 DNAJC18Q9H819 358 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 METTL14Q9HCE5 456 aaKnown RBP10.26□□□□□ -0.77
SMC1B-202ENST00000404354 FRMD4BQ9Y2L6 1034 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 ARL2BPQ9Y2Y0 163 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 PCDHAC2Q9Y5I4 1007 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 EMSYQ7Z589 1322 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.26□□□□□ -0.77
SMC1B-202ENST00000404354 MYH14Q7Z406 1995 aaKnown RBP10.26□□□□□ -0.77
SMC1B-202ENST00000404354 FAM187AA6NFU0 413 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 SPDYE5A6NIY4 337 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 ECEL1O95672 775 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 RARGP13631 454 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 EPHB2P29323 1055 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 CHRNA3P32297 505 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 ITGA8P53708 1063 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 DHX34Q14147 1143 aaKnown RBP10.26□□□□□ -0.77
SMC1B-202ENST00000404354 CGB2Q6NT52 195 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 RINT1Q6NUQ1 792 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 PPP4R3CPQ6ZMV5 832 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 HS2ST1Q7LGA3 356 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 SLC47A2Q86VL8 602 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 SUPT20HQ8NEM7 779 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 ZNF622Q969S3 477 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMC1B-202ENST00000404354 DYDC2Q96IM9 177 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 EIF2AK1Q9BQI3 630 aaKnown RBP10.26□□□□□ -0.77
SMC1B-202ENST00000404354 ZSWIM1Q9BR11 485 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 NUP85Q9BW27 656 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 APEX2Q9UBZ4 518 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 DCTN4Q9UJW0 460 aa10.26□□□□□ -0.77
SMC1B-202ENST00000404354 ZNF335Q9H4Z2 1342 aaPredicted RBP10.26□□□□□ -0.77
SMC1B-202ENST00000404354 DPPA5A6NC42 116 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 GSTA1P08263 222 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 CCND1P24385 295 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 RRP1BQ14684 758 aaKnown RBP10.25□□□□□ -0.77
SMC1B-202ENST00000404354 ARMC3Q5W041 872 aa10.25□□□□□ -0.77
SMC1B-202ENST00000404354 MIS18BP1Q6P0N0 1132 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms