RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 TBC1D32Q96NH3 1257 aa13.76□□□□□ -0.21
PRAME-204ENST00000403441 LXNQ9BS40 222 aa13.76□□□□□ -0.21
PRAME-204ENST00000403441 MINDY3Q9H8M7 445 aa13.76□□□□□ -0.21
PRAME-204ENST00000403441 KCNMB3Q9NPA1 279 aa13.76□□□□□ -0.21
PRAME-204ENST00000403441 BMP2KQ9NSY1 1161 aaPredicted RBP13.76□□□□□ -0.21
PRAME-204ENST00000403441 PLXNA3P51805 1871 aa13.76□□□□□ -0.21
PRAME-204ENST00000403441 PTPRZ1P23471 2315 aaPredicted RBP13.75□□□□□ -0.21
PRAME-204ENST00000403441 C2CD2LO14523 706 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 NRP1O14786 923 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 TBX3O15119 743 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 CCNT1O60563 726 aaKnown RBP13.75□□□□□ -0.21
PRAME-204ENST00000403441 NR1I2O75469 434 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 SOD2P04179 222 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 ITGA4P13612 1032 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 HOXA11P31270 313 aaPredicted RBP13.75□□□□□ -0.21
PRAME-204ENST00000403441 YWHABP31946 246 aaKnown RBP13.75□□□□□ -0.21
PRAME-204ENST00000403441 NCBP1Q09161 790 aaKnown RBP13.75□□□□□ -0.21
PRAME-204ENST00000403441 RABEP1Q15276 862 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 UBXN11Q5T124 520 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 C4orf19Q8IY42 314 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 ZNF579Q8NAF0 562 aaKnown RBP13.75□□□□□ -0.21
PRAME-204ENST00000403441 CMASQ8NFW8 434 aaPredicted RBP13.75□□□□□ -0.21
PRAME-204ENST00000403441 STAMQ92783 540 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 CCDC51Q96ER9 411 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 HERC2P3Q9BVR0 1158 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 MAN1C1Q9NR34 630 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 IGSF9Q9P2J2 1179 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 ORC3Q9UBD5 711 aaPredicted RBP13.75□□□□□ -0.21
PRAME-204ENST00000403441 DUSP12Q9UNI6 340 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 KCNJ14Q9UNX9 436 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 PRG3Q9Y2Y8 225 aaPredicted RBP13.75□□□□□ -0.21
PRAME-204ENST00000403441 RIF1Q5UIP0 2472 aaKnown RBP13.75□□□□□ -0.21
PRAME-204ENST00000403441 MYO15AQ9UKN7 3530 aa13.75□□□□□ -0.21
PRAME-204ENST00000403441 PRR23AA6NEV1 266 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 GLUD1P00367 558 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 AXLP30530 894 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 OR1G1P47890 313 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 GLUD2P49448 558 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 AFF1P51825 1210 aaKnown RBP13.74□□□□□ -0.21
PRAME-204ENST00000403441 TFDP1Q14186 410 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 MXD4Q14582 209 aaPredicted RBP13.74□□□□□ -0.21
PRAME-204ENST00000403441 EPHA7Q15375 998 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 XKR9Q5GH70 373 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 NCAPH2Q6IBW4 605 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 NOTUMQ6P988 496 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 CYP26C1Q6V0L0 522 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 ASCL5Q7RTU5 278 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 FERMT3Q86UX7 667 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 SLFN12Q8IYM2 578 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 HACE1Q8IYU2 909 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 SIX5Q8N196 739 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 WASF1Q92558 559 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 TNFRSF25Q93038 417 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 NKD2Q969F2 451 aaPredicted RBP13.74□□□□□ -0.21
PRAME-204ENST00000403441 ZSCAN31Q96LW9 406 aaPredicted RBP13.74□□□□□ -0.21
PRAME-204ENST00000403441 RPS6KC1Q96S38 1066 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 MTRQ99707 1265 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 LLPHQ9BRT6 129 aaKnown RBP13.74□□□□□ -0.21
PRAME-204ENST00000403441 ZSWIM4Q9H7M6 989 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 KCNK12Q9HB15 430 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 GJB4Q9NTQ9 266 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 WRAP73Q9P2S5 460 aaPredicted RBP13.74□□□□□ -0.21
PRAME-204ENST00000403441 IPPQ9Y573 584 aa13.74□□□□□ -0.21
PRAME-204ENST00000403441 FAM186AA6NE01 2351 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 SPTBN4Q9H254 2564 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 ARL5CA6NH57 179 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 TEX28O15482 410 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 TSPAN1O60635 241 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 JAK2O60674 1132 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 LILRB3O75022 631 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 BAG4O95429 457 aaKnown RBP13.73□□□□□ -0.21
PRAME-204ENST00000403441 AOC1P19801 751 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 RFX1P22670 979 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 GBP2P32456 591 aaPredicted RBP13.73□□□□□ -0.21
PRAME-204ENST00000403441 MLH1P40692 756 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 CYP4A11Q02928 519 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 CWF19L1Q69YN2 538 aaKnown RBP13.73□□□□□ -0.21
PRAME-204ENST00000403441 PIK3AP1Q6ZUJ8 805 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 FRMD5Q7Z6J6 570 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 COLGALT2Q8IYK4 626 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 SMG8Q8ND04 991 aaKnown RBP13.73□□□□□ -0.21
PRAME-204ENST00000403441 FEZF2Q8TBJ5 459 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 CCDC43Q96MW1 224 aaKnown RBP13.73□□□□□ -0.21
PRAME-204ENST00000403441 RTP3Q9BQQ7 232 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 BACH2Q9BYV9 841 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 TRIM6Q9C030 488 aaPredicted RBP13.73□□□□□ -0.21
PRAME-204ENST00000403441 SH2B1Q9NRF2 756 aaPredicted RBP13.73□□□□□ -0.21
PRAME-204ENST00000403441 MARCH5Q9NX47 278 aa13.73□□□□□ -0.21
PRAME-204ENST00000403441 C2orf16Q68DN1 1984 aa13.72□□□□□ -0.21
PRAME-204ENST00000403441 CLUHO75153 1309 aa13.72□□□□□ -0.21
PRAME-204ENST00000403441 VPS13AQ96RL7 3174 aa13.72□□□□□ -0.21
PRAME-204ENST00000403441 ARID2Q68CP9 1835 aa13.72□□□□□ -0.21
PRAME-204ENST00000403441 CCDC195A0A1B0GUA6 201 aa13.72□□□□□ -0.21
PRAME-204ENST00000403441 INO80B-WBP1J3KQ70 363 aa13.72□□□□□ -0.21
PRAME-204ENST00000403441 INPPL1O15357 1258 aa13.72□□□□□ -0.21
PRAME-204ENST00000403441 DTNBO60941 627 aa13.72□□□□□ -0.21
PRAME-204ENST00000403441 FOXK2Q01167 660 aa13.72□□□□□ -0.21
PRAME-204ENST00000403441 CTTNQ14247 550 aaKnown RBP13.72□□□□□ -0.21
PRAME-204ENST00000403441 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
PRAME-204ENST00000403441 CCDC105Q8IYK2 499 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms