RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 NT5DC1Q5TFE4 455 aa21.14■□□□□ 0.98
RTN4-207ENST00000402434 SV2BQ7L1I2 683 aa21.14■□□□□ 0.98
RTN4-207ENST00000402434 TRIM6Q9C030 488 aaPredicted RBP21.14■□□□□ 0.98
RTN4-207ENST00000402434 RNF39Q9H2S5 420 aa21.14■□□□□ 0.98
RTN4-207ENST00000402434 RSAD1Q9HA92 442 aa21.14■□□□□ 0.98
RTN4-207ENST00000402434 UBN1Q9NPG3 1134 aa21.14■□□□□ 0.98
RTN4-207ENST00000402434 AAASQ9NRG9 546 aa21.14■□□□□ 0.98
RTN4-207ENST00000402434 PLAGL2Q9UPG8 496 aa21.14■□□□□ 0.98
RTN4-207ENST00000402434 USP20Q9Y2K6 914 aa21.14■□□□□ 0.98
RTN4-207ENST00000402434 HES2Q9Y543 173 aa21.14■□□□□ 0.98
RTN4-207ENST00000402434 EYSQ5T1H1 3165 aa21.14■□□□□ 0.97
RTN4-207ENST00000402434 INPPL1O15357 1258 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 KRT18P05783 430 aaKnown RBP21.13■□□□□ 0.97
RTN4-207ENST00000402434 ITGA4P13612 1032 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 LAG3P18627 525 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 LIG1P18858 919 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 NUCB2P80303 420 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 NOMO2Q5JPE7 1267 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 PDILTQ8N807 584 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 LEO1Q8WVC0 666 aaPredicted RBP21.13■□□□□ 0.97
RTN4-207ENST00000402434 CHAMP1Q96JM3 812 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 NXF3Q9H4D5 531 aaKnown RBP21.13■□□□□ 0.97
RTN4-207ENST00000402434 PARVGQ9HBI0 331 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 PCDHB12Q9Y5F1 795 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 COL4A4P53420 1690 aaPredicted RBP21.13■□□□□ 0.97
RTN4-207ENST00000402434 MYO7AQ13402 2215 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 KIAA1671Q9BY89 1806 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 MYMKA6NI61 221 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 FAM13AO94988 1023 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 NPTXRO95502 500 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 SCP2P22307 547 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 NCKAP1LP55160 1127 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 CSPP1Q1MSJ5 1256 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 ATF7IP2Q5U623 682 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 KLHL23Q8NBE8 558 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 COLGALT1Q8NBJ5 622 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 DDX12PQ92771 950 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 MRPL38Q96DV4 380 aaKnown RBP21.13■□□□□ 0.97
RTN4-207ENST00000402434 TBC1D13Q9NVG8 400 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 TNFSF13BQ9Y275 285 aa21.13■□□□□ 0.97
RTN4-207ENST00000402434 PRUNE2Q8WUY3 3088 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 H0YCG3 227 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 GRM6O15303 877 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 ITGB1P05556 798 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 MAPTP10636 758 aaKnown RBP21.12■□□□□ 0.97
RTN4-207ENST00000402434 AFF1P51825 1210 aaKnown RBP21.12■□□□□ 0.97
RTN4-207ENST00000402434 PTPROQ16827 1216 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 SPOUT1Q5T280 376 aaKnown RBP21.12■□□□□ 0.97
RTN4-207ENST00000402434 RESP18Q5W5W9 173 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 EEF1DP3Q658K8 133 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 HACE1Q8IYU2 909 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 MYCT1Q8N699 235 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 DNAJC19Q96DA6 116 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 SPATA32Q96LK8 384 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 FIZ1Q96SL8 496 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 ACO2Q99798 780 aaKnown RBP21.12■□□□□ 0.97
RTN4-207ENST00000402434 ADPGKQ9BRR6 497 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 LMAN2LQ9H0V9 348 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 CUEDC2Q9H467 287 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 PTPRHQ9HD43 1115 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 KANSL3Q9P2N6 904 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 GIT1Q9Y2X7 761 aa21.12■□□□□ 0.97
RTN4-207ENST00000402434 TCHHQ07283 1943 aa21.11■□□□□ 0.97
RTN4-207ENST00000402434 TRAK2O60296 914 aa21.11■□□□□ 0.97
RTN4-207ENST00000402434 TBCAO75347 108 aaKnown RBP21.11■□□□□ 0.97
RTN4-207ENST00000402434 TMEM132AQ24JP5 1023 aa21.11■□□□□ 0.97
RTN4-207ENST00000402434 KCNT2Q6UVM3 1135 aa21.11■□□□□ 0.97
RTN4-207ENST00000402434 HAUS6Q7Z4H7 955 aa21.11■□□□□ 0.97
RTN4-207ENST00000402434 IQUBQ8NA54 791 aa21.11■□□□□ 0.97
RTN4-207ENST00000402434 SPPL3Q8TCT6 385 aa21.11■□□□□ 0.97
RTN4-207ENST00000402434 MRPL4Q9BYD3 311 aaKnown RBP21.11■□□□□ 0.97
RTN4-207ENST00000402434 SCAND2PQ9GZW5 306 aaPredicted RBP21.11■□□□□ 0.97
RTN4-207ENST00000402434 ALG13Q9NP73 1137 aaKnown RBP21.11■□□□□ 0.97
RTN4-207ENST00000402434 INPP5FQ9Y2H2 1132 aa21.11■□□□□ 0.97
RTN4-207ENST00000402434 ZMYM2Q9UBW7 1377 aa21.1■□□□□ 0.97
RTN4-207ENST00000402434 ARL5CA6NH57 179 aa21.1■□□□□ 0.97
RTN4-207ENST00000402434 CAMK1Q14012 370 aa21.1■□□□□ 0.97
RTN4-207ENST00000402434 DCAF4L1Q3SXM0 396 aa21.1■□□□□ 0.97
RTN4-207ENST00000402434 ADALQ6DHV7 355 aa21.1■□□□□ 0.97
RTN4-207ENST00000402434 DYMQ7RTS9 669 aa21.1■□□□□ 0.97
RTN4-207ENST00000402434 URGCPQ8TCY9 931 aa21.1■□□□□ 0.97
RTN4-207ENST00000402434 ZNF558Q96NG5 402 aa21.1■□□□□ 0.97
RTN4-207ENST00000402434 TARS2Q9BW92 718 aaKnown RBP21.1■□□□□ 0.97
RTN4-207ENST00000402434 KBTBD4Q9NVX7 518 aa21.1■□□□□ 0.97
RTN4-207ENST00000402434 CARNS1A5YM72 827 aa21.09■□□□□ 0.97
RTN4-207ENST00000402434 FGF18O76093 207 aa21.09■□□□□ 0.97
RTN4-207ENST00000402434 PROZP22891 400 aa21.09■□□□□ 0.97
RTN4-207ENST00000402434 AKAP5P24588 427 aa21.09■□□□□ 0.97
RTN4-207ENST00000402434 STRN3Q13033 797 aa21.09■□□□□ 0.97
RTN4-207ENST00000402434 CCDC85BQ15834 202 aaPredicted RBP21.09■□□□□ 0.97
RTN4-207ENST00000402434 GSTCDQ8NEC7 633 aa21.09■□□□□ 0.97
RTN4-207ENST00000402434 GAD1Q99259 594 aa21.09■□□□□ 0.97
RTN4-207ENST00000402434 TNMDQ9H2S6 317 aa21.09■□□□□ 0.97
RTN4-207ENST00000402434 ST6GALNAC4Q9H4F1 302 aa21.09■□□□□ 0.97
RTN4-207ENST00000402434 ZHX3Q9H4I2 956 aa21.09■□□□□ 0.97
RTN4-207ENST00000402434 NRDE2Q9H7Z3 1164 aa21.09■□□□□ 0.97
RTN4-207ENST00000402434 FAM13BQ9NYF5 915 aa21.09■□□□□ 0.97
RTN4-207ENST00000402434 SEL1LQ9UBV2 794 aa21.09■□□□□ 0.97
RTN4-207ENST00000402434 ABLIM1O14639 778 aa21.08■□□□□ 0.97
RTN4-207ENST00000402434 CMA1P23946 247 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms