RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 APBA1Q02410 837 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 PPFIA1Q13136 1202 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 IFI16Q16666 785 aaKnown RBP17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 MAP3K21Q5TCX8 1036 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 TRPV1Q8NER1 839 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 JPH1Q9HDC5 661 aaPredicted RBP17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 GDF3Q9NR23 364 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 PTCH2Q9Y6C5 1203 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 SMPD1P17405 629 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 RPL13P26373 211 aaKnown RBP17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 KRT76Q01546 638 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 ARID5AQ03989 594 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 TRIM32Q13049 653 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 CELF3Q5SZQ8 465 aaKnown RBP17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 TMEM63BQ5T3F8 832 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 DPY19L2P1Q6NXN4 242 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 METTL7BQ6UX53 244 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 GBP6Q6ZN66 633 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 CYFIP1Q7L576 1253 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 SRLQ86TD4 932 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 MS4A14Q96JA4 679 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 POLR3CQ9BUI4 534 aaPredicted RBP17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 TYW1Q9NV66 732 aaKnown RBP17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 SLC9A2Q9UBY0 812 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 ADAMTS1Q9UHI8 967 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 FBXL5Q9UKA1 691 aa17.29■□□□□ 0.36
CHRFAM7A-203ENST00000401522 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 HSF2BPO75031 334 aa17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 FARP2O94887 1054 aaPredicted RBP17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 GGPS1O95749 300 aa17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 FTCDO95954 541 aa17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 UCHL3P15374 230 aa17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 PSMC6P62333 389 aa17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 TNFAIP2Q03169 654 aa17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 PAK2Q13177 524 aa17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 EXOC3L4Q17RC7 722 aa17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 ZNF746Q6NUN9 644 aaPredicted RBP17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 IRF2BP2Q7Z5L9 587 aa17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 CTU1Q7Z7A3 348 aaKnown RBP17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 EMID1Q96A84 441 aaPredicted RBP17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 SPAG5Q96R06 1193 aa17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 UNC45AQ9H3U1 944 aa17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 RRP15Q9Y3B9 282 aaKnown RBP17.28■□□□□ 0.36
CHRFAM7A-203ENST00000401522 DDX39AO00148 427 aaKnown RBP17.27■□□□□ 0.36
CHRFAM7A-203ENST00000401522 PPFIA4O75335 1185 aa17.27■□□□□ 0.36
CHRFAM7A-203ENST00000401522 TBCAO75347 108 aaKnown RBP17.27■□□□□ 0.36
CHRFAM7A-203ENST00000401522 CCNE2O96020 404 aa17.27■□□□□ 0.36
CHRFAM7A-203ENST00000401522 PRKAR2AP13861 404 aaKnown RBP17.27■□□□□ 0.36
CHRFAM7A-203ENST00000401522 AKR1A1P14550 325 aa17.27■□□□□ 0.36
CHRFAM7A-203ENST00000401522 GAP43P17677 238 aa17.27■□□□□ 0.36
CHRFAM7A-203ENST00000401522 HOXD13P35453 343 aa17.27■□□□□ 0.36
CHRFAM7A-203ENST00000401522 PRKCIP41743 596 aa17.27■□□□□ 0.36
CHRFAM7A-203ENST00000401522 DHX37Q8IY37 1157 aaKnown RBP17.27■□□□□ 0.36
CHRFAM7A-203ENST00000401522 TAF4BQ92750 862 aa17.27■□□□□ 0.36
CHRFAM7A-203ENST00000401522 RUFY1Q96T51 708 aa17.27■□□□□ 0.36
CHRFAM7A-203ENST00000401522 GNEQ9Y223 722 aaKnown RBP17.27■□□□□ 0.36
CHRFAM7A-203ENST00000401522 MYH10P35580 1976 aa17.27■□□□□ 0.36
CHRFAM7A-203ENST00000401522 HTTP42858 3142 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 EML1O00423 815 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 ADCY6O43306 1168 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 EYA4O95677 639 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 GH1P01241 217 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 NR3C1P04150 777 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 MYBP10242 640 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 PON1P27169 355 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SFNP31947 248 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 TNNC1P63316 161 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 PTK2Q05397 1052 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 LAMC2Q13753 1193 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 EPHA7Q15375 998 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 COPS5Q92905 334 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 HINFPQ9BQA5 517 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 PACSIN1Q9BY11 444 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 TCEAL9Q9UHQ7 104 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 Q9Y3F1 56 aa17.27■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SEPT4O43236 478 aa17.26■□□□□ 0.35
CHRFAM7A-203ENST00000401522 ATG7O95352 703 aa17.26■□□□□ 0.35
CHRFAM7A-203ENST00000401522 ACTN1P12814 892 aa17.26■□□□□ 0.35
CHRFAM7A-203ENST00000401522 SLC9A1P19634 815 aa17.26■□□□□ 0.35
CHRFAM7A-203ENST00000401522 JAK3P52333 1124 aa17.26■□□□□ 0.35
CHRFAM7A-203ENST00000401522 MRPS25P82663 173 aaKnown RBP17.26■□□□□ 0.35
CHRFAM7A-203ENST00000401522 ARHGAP1Q07960 439 aa17.26■□□□□ 0.35
CHRFAM7A-203ENST00000401522 ZNF571Q7Z3V5 609 aaPredicted RBP17.26■□□□□ 0.35
CHRFAM7A-203ENST00000401522 RDM1Q8NG50 284 aa17.26■□□□□ 0.35
CHRFAM7A-203ENST00000401522 GTPBP10A4D1E9 387 aaKnown RBP17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 WDR64B1ANS9 1081 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 MYO1CO00159 1063 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 CHMP2AO43633 222 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 HEXIM1O94992 359 aaKnown RBP17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 INHAP05111 366 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 ACTR2P61160 394 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 RPS6KA1Q15418 735 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 ENOX2Q16206 610 aaKnown RBP17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 PKN2Q16513 984 aaKnown RBP17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 VPS36Q86VN1 386 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 MREGQ8N565 214 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 TSEN2Q8NCE0 465 aaKnown RBP17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 PBKQ96KB5 322 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 HSD17B14Q9BPX1 270 aa17.25■□□□□ 0.35
CHRFAM7A-203ENST00000401522 OLFML3Q9NRN5 406 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms