RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 GYG2O15488 501 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 MEFVO15553 781 aaPredicted RBP14.6□□□□□ -0.07
VAPA-202ENST00000400000 ARL4CP56559 192 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 TNFAIP2Q03169 654 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 ZNF235Q14590 738 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 SGO1Q5FBB7 561 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 LRRC8EQ6NSJ5 796 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 EFHBQ8N7U6 833 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 CLMNQ96JQ2 1002 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 STRBPQ96SI9 672 aaKnown RBP14.6□□□□□ -0.07
VAPA-202ENST00000400000 INTS2Q9H0H0 1204 aaKnown RBP14.6□□□□□ -0.07
VAPA-202ENST00000400000 MUC3BQ9H195 1237 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.6□□□□□ -0.07
VAPA-202ENST00000400000 AXIN2Q9Y2T1 843 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 PRRG1O14668 218 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 CDC27P30260 824 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 ROR1Q01973 937 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 RABGGTAQ92696 567 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 L3MBTL3Q96JM7 780 aaPredicted RBP14.6□□□□□ -0.07
VAPA-202ENST00000400000 MAGEB10Q96LZ2 347 aaPredicted RBP14.6□□□□□ -0.07
VAPA-202ENST00000400000 GCC2Q8IWJ2 1684 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 CPDO75976 1380 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 SPDYE5A6NIY4 337 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 F5H6K3 240 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 CELF2O95319 508 aaKnown RBP14.6□□□□□ -0.07
VAPA-202ENST00000400000 NMT1P30419 496 aaKnown RBP14.6□□□□□ -0.07
VAPA-202ENST00000400000 ARL4DP49703 201 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 KLRC3Q07444 240 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 SPDYE7PQ495Y7 208 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 PID1Q7Z2X4 250 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 VSTM4Q8IW00 320 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 ENAHQ8N8S7 591 aaPredicted RBP14.6□□□□□ -0.07
VAPA-202ENST00000400000 XXYLT1Q8NBI6 393 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 MAP10Q9P2G4 905 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 APOBEC2Q9Y235 224 aaKnown RBP14.6□□□□□ -0.07
VAPA-202ENST00000400000 SCINQ9Y6U3 715 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 FAM135BQ49AJ0 1406 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 SSH2Q76I76 1423 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 MAPK13O15264 365 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 PYGLP06737 847 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 MCF2P10911 925 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 FGFR4P22455 802 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 CDH6P55285 790 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 ANGEL2Q5VTE6 544 aaKnown RBP14.6□□□□□ -0.07
VAPA-202ENST00000400000 C1orf146Q5VVC0 180 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 HS6ST3Q8IZP7 471 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 SERPINI1Q99574 410 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.6□□□□□ -0.07
VAPA-202ENST00000400000 AKT1P31749 480 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 GPC5P78333 572 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 V9GYQ6 96 aa14.6□□□□□ -0.07
VAPA-202ENST00000400000 IPO5O00410 1097 aaKnown RBP14.59□□□□□ -0.07
VAPA-202ENST00000400000 PJA2O43164 708 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 PMS1P54277 932 aaKnown RBP14.59□□□□□ -0.07
VAPA-202ENST00000400000 MFSD4BQ5TF39 518 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 MRPL4Q9BYD3 311 aaKnown RBP14.59□□□□□ -0.07
VAPA-202ENST00000400000 CHORDC1Q9UHD1 332 aaPredicted RBP14.59□□□□□ -0.07
VAPA-202ENST00000400000 CYP26A1O43174 497 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 TTC23LQ6PF05 361 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 ACAD11Q709F0 780 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 TMEM35BQ8NCS4 154 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 SLC9A2Q9UBY0 812 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 EMSYQ7Z589 1322 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 KCNN4O15554 427 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 MAGOHP61326 146 aaKnown RBP14.59□□□□□ -0.07
VAPA-202ENST00000400000 EFTUD2Q15029 972 aaKnown RBP eCLIP14.59□□□□□ -0.073e-9■■■■□ 26.5
VAPA-202ENST00000400000 QRICH1Q2TAL8 776 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 MS4A14Q96JA4 679 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 MRPL42Q9Y6G3 142 aaKnown RBP14.59□□□□□ -0.07
VAPA-202ENST00000400000 ARIH2O95376 493 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 IFNAR1P17181 557 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 PWP1Q13610 501 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 SYTL3Q4VX76 610 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 EPAS1Q99814 870 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 AURKCQ9UQB9 309 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 FAM47DPA6NHR8 397 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 ERVV-1B6SEH8 477 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 EPB42P16452 691 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 SCARF1Q14162 830 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 MGAT5BQ3V5L5 792 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 EFHC2Q5JST6 749 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 RCSD1Q6JBY9 416 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 TXLNGQ9NUQ3 528 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 ZFP69BQ9UJL9 534 aa14.59□□□□□ -0.07
VAPA-202ENST00000400000 RFX3P48380 749 aa14.58□□□□□ -0.07
VAPA-202ENST00000400000 CLCN6P51797 869 aa14.58□□□□□ -0.07
VAPA-202ENST00000400000 CASP8Q14790 479 aa14.58□□□□□ -0.07
VAPA-202ENST00000400000 BZW1Q7L1Q6 419 aaKnown RBP14.58□□□□□ -0.07
VAPA-202ENST00000400000 RPAINQ86UA6 219 aa14.58□□□□□ -0.07
VAPA-202ENST00000400000 TRIM15Q9C019 465 aa14.58□□□□□ -0.07
VAPA-202ENST00000400000 ABCA5Q8WWZ7 1642 aa14.58□□□□□ -0.07
VAPA-202ENST00000400000 AK9Q5TCS8 1911 aa14.58□□□□□ -0.07
VAPA-202ENST00000400000 DNMT1P26358 1616 aaKnown RBP14.58□□□□□ -0.07
VAPA-202ENST00000400000 CYP27B1O15528 508 aa14.58□□□□□ -0.08
VAPA-202ENST00000400000 AKR1B1P15121 316 aa14.58□□□□□ -0.08
VAPA-202ENST00000400000 ALDH18A1P54886 795 aaKnown RBP14.58□□□□□ -0.08
VAPA-202ENST00000400000 NAF1Q96HR8 494 aaKnown RBP14.58□□□□□ -0.08
VAPA-202ENST00000400000 DDX47Q9H0S4 455 aaKnown RBP14.58□□□□□ -0.08
VAPA-202ENST00000400000 CDC25BP30305 580 aa14.58□□□□□ -0.08
VAPA-202ENST00000400000 OR1G1P47890 313 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms