RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 PRMT3O60678 531 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 ZNF806P0C7X5 589 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 TTC41PQ6P2S7 1318 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 PHF11Q9UIL8 331 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 TNPO2O14787 897 aaKnown RBP9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 DHX15O43143 795 aaKnown RBP9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 ACADSP16219 412 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 TPP2P29144 1249 aaPredicted RBP9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 LRRC70Q7Z2Q7 622 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 RNF139Q8WU17 664 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 RABGEF1Q9UJ41 708 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 TNFRSF21O75509 655 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 ZNF846Q147U1 533 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 SH3TC2Q8TF17 1288 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 FAM162AQ96A26 154 aa9.06□□□□□ -0.96
CACNA1C-220ENST00000399655 IFRD1O00458 451 aaPredicted RBP9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 HIRAP54198 1017 aaPredicted RBP9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 TUBA1BP68363 451 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 ARID5BQ14865 1188 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 SWI5Q1ZZU3 235 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 TUBA1AQ71U36 451 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 KBTBD3Q8NAB2 608 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 VAV1P15498 845 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 PIK3CAP42336 1068 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 GRHL2Q6ISB3 625 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 CAPN12Q6ZSI9 719 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 ARHGAP22Q7Z5H3 698 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 SPAG16Q8N0X2 631 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 MAGOHBQ96A72 148 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 PCMTD2Q9NV79 361 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 SMAPO00193 183 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 VBP1P61758 197 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 STK4Q13043 487 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 NEK5Q6P3R8 708 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 FNDC3AQ9Y2H6 1198 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 IRAK3Q9Y616 596 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 AREL1O15033 823 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 NPY2RP49146 381 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 TRAF3Q13114 568 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 SMIM5Q71RC9 77 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 EFL1Q7Z2Z2 1120 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 PIK3C3Q8NEB9 887 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 FAM81AQ8TBF8 368 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 NELFBQ8WX92 580 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 TMEM168Q9H0V1 697 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 TJP3O95049 919 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 OSBPP22059 807 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 ARL4DP49703 201 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 MYBPC2Q14324 1141 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 OLFML2AQ68BL7 652 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 ABT1Q9ULW3 272 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 TTC33Q6PID6 262 aaPredicted RBP9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 HEATR4Q86WZ0 1026 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 FAM9CQ8IZT9 166 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 MSL3Q8N5Y2 521 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 ELMO2Q96JJ3 720 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 NLRP14Q86W24 1093 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 TRMT112Q9UI30 125 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 PPP3CCP48454 512 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 SLFN12Q8IYM2 578 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 MYO1GB0I1T2 1018 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 AFPP02771 609 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 HAUS5O94927 633 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 BMP10O95393 424 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 FOXD4Q12950 439 aaPredicted RBP9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 SLC29A2Q14542 456 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 NFIL3Q16649 462 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 TIMM50Q3ZCQ8 353 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 MFSD4BQ5TF39 518 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 DARS2Q6PI48 645 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 ELMOD1Q8N336 334 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 U2AF1L4Q8WU68 220 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 GINS2Q9Y248 185 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 COBLO75128 1261 aa9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 G3BP2Q9UN86 482 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-220ENST00000399655 KANSL1LA0AUZ9 987 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 DEXIO95424 95 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 HECTD3Q5T447 861 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 CYP4Z1Q86W10 505 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 ASAP3Q8TDY4 903 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 ALKBH8Q96BT7 664 aaKnown RBP9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 BICC1Q9H694 974 aaKnown RBP9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 USP40Q9NVE5 1235 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 MAD2L2Q9UI95 211 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 SNX7Q9UNH6 387 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 GFPT2O94808 682 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 HDAC6Q9UBN7 1215 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 MYH7P12883 1935 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 ALDH1A2O94788 518 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 PRLP01236 227 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 FNTAP49354 379 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 KCTD16Q68DU8 428 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 WWP1Q9H0M0 922 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 CDH7Q9ULB5 785 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 MAST3O60307 1309 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 EVPLLA8MZ36 301 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 PRPSAP2O60256 369 aa9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 CNOT3O75175 753 aaKnown RBP9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 LDOC1O95751 146 aaPredicted RBP9.04□□□□□ -0.96
CACNA1C-220ENST00000399655 PPP2R1BP30154 601 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms