RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 NT5DC1Q5TFE4 455 aa19.41■□□□□ 0.7
CTNS-203ENST00000399306 ATF7IP2Q5U623 682 aa19.41■□□□□ 0.7
CTNS-203ENST00000399306 FAM109BQ6ICB4 259 aaPredicted RBP19.41■□□□□ 0.7
CTNS-203ENST00000399306 MAP4K3Q8IVH8 894 aa19.41■□□□□ 0.7
CTNS-203ENST00000399306 CMTR2Q8IYT2 770 aaKnown RBP19.41■□□□□ 0.7
CTNS-203ENST00000399306 STAMQ92783 540 aa19.41■□□□□ 0.7
CTNS-203ENST00000399306 PBX4Q9BYU1 374 aa19.41■□□□□ 0.7
CTNS-203ENST00000399306 MRPL44Q9H9J2 332 aaKnown RBP19.41■□□□□ 0.7
CTNS-203ENST00000399306 HOOK1Q9UJC3 728 aaKnown RBP19.41■□□□□ 0.7
CTNS-203ENST00000399306 TBX20Q9UMR3 447 aa19.41■□□□□ 0.7
CTNS-203ENST00000399306 PCDHB2Q9Y5E7 798 aa19.41■□□□□ 0.7
CTNS-203ENST00000399306 FNDC1Q4ZHG4 1894 aaPredicted RBP19.4■□□□□ 0.7
CTNS-203ENST00000399306 TOM1L1O75674 476 aa19.4■□□□□ 0.7
CTNS-203ENST00000399306 ATF7P17544 494 aaPredicted RBP19.4■□□□□ 0.7
CTNS-203ENST00000399306 PROZP22891 400 aa19.4■□□□□ 0.7
CTNS-203ENST00000399306 AFMP43652 599 aa19.4■□□□□ 0.7
CTNS-203ENST00000399306 PSMD2Q13200 908 aa19.4■□□□□ 0.7
CTNS-203ENST00000399306 CUL4BQ13620 913 aa19.4■□□□□ 0.7
CTNS-203ENST00000399306 YME1L1Q96TA2 773 aa19.4■□□□□ 0.7
CTNS-203ENST00000399306 PDZD7Q9H5P4 517 aa19.4■□□□□ 0.7
CTNS-203ENST00000399306 PTPRHQ9HD43 1115 aa19.4■□□□□ 0.7
CTNS-203ENST00000399306 INPPL1O15357 1258 aa19.39■□□□□ 0.69
CTNS-203ENST00000399306 EIF3DO15371 548 aaKnown RBP eCLIP19.39■□□□□ 0.69
CTNS-203ENST00000399306 DNAJB2P25686 324 aa19.39■□□□□ 0.69
CTNS-203ENST00000399306 NMT1P30419 496 aaKnown RBP19.39■□□□□ 0.69
CTNS-203ENST00000399306 FAM26FQ5R3K3 315 aa19.39■□□□□ 0.69
CTNS-203ENST00000399306 CCDC47Q96A33 483 aaKnown RBP19.39■□□□□ 0.69
CTNS-203ENST00000399306 CPB2Q96IY4 423 aa19.39■□□□□ 0.69
CTNS-203ENST00000399306 GTPBP4Q9BZE4 634 aaKnown RBP19.39■□□□□ 0.69
CTNS-203ENST00000399306 TRIM6Q9C030 488 aaPredicted RBP19.39■□□□□ 0.69
CTNS-203ENST00000399306 TMEM117Q9H0C3 514 aa19.39■□□□□ 0.69
CTNS-203ENST00000399306 EXOC7Q9UPT5 735 aa19.39■□□□□ 0.69
CTNS-203ENST00000399306 UBE4BO95155 1302 aa19.39■□□□□ 0.69
CTNS-203ENST00000399306 CARNS1A5YM72 827 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 GRXCR1A8MXD5 290 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 GOLGA6L22H0YM25 854 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 KLRC4O43908 158 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 KINO60870 393 aaKnown RBP19.38■□□□□ 0.69
CTNS-203ENST00000399306 GADD45BO75293 160 aaPredicted RBP19.38■□□□□ 0.69
CTNS-203ENST00000399306 PRPF40AO75400 957 aaKnown RBP19.38■□□□□ 0.69
CTNS-203ENST00000399306 UPP2O95045 317 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 EDN1P05305 212 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 MCF2P10911 925 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 DPYDQ12882 1025 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 KCNB1Q14721 858 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 KYAT1Q16773 422 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 TMEM132AQ24JP5 1023 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 L1TD1Q5T7N2 865 aaKnown RBP19.38■□□□□ 0.69
CTNS-203ENST00000399306 MPZL3Q6UWV2 235 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 TIFAQ96CG3 184 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 SAMD11Q96NU1 681 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 TMEM206Q9H813 350 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 GIT1Q9Y2X7 761 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 IPPQ9Y573 584 aa19.38■□□□□ 0.69
CTNS-203ENST00000399306 TTLL13PA6NNM8 815 aa19.37■□□□□ 0.69
CTNS-203ENST00000399306 ABLIM1O14639 778 aa19.37■□□□□ 0.69
CTNS-203ENST00000399306 NR1I2O75469 434 aa19.37■□□□□ 0.69
CTNS-203ENST00000399306 GCNT3O95395 438 aa19.37■□□□□ 0.69
CTNS-203ENST00000399306 LIG1P18858 919 aa19.37■□□□□ 0.69
CTNS-203ENST00000399306 POSTNQ15063 836 aa19.37■□□□□ 0.69
CTNS-203ENST00000399306 SMG8Q8ND04 991 aaKnown RBP19.37■□□□□ 0.69
CTNS-203ENST00000399306 ACCSQ96QU6 501 aa19.37■□□□□ 0.69
CTNS-203ENST00000399306 TARS2Q9BW92 718 aaKnown RBP19.37■□□□□ 0.69
CTNS-203ENST00000399306 EIF2AQ9BY44 585 aaKnown RBP19.37■□□□□ 0.69
CTNS-203ENST00000399306 MRPL9Q9BYD2 267 aaKnown RBP19.37■□□□□ 0.69
CTNS-203ENST00000399306 BLZF1Q9H2G9 400 aa19.37■□□□□ 0.69
CTNS-203ENST00000399306 RNF19AQ9NV58 838 aa19.37■□□□□ 0.69
CTNS-203ENST00000399306 RWDD3Q9Y3V2 267 aa19.37■□□□□ 0.69
CTNS-203ENST00000399306 STYXL1Q9Y6J8 313 aa19.37■□□□□ 0.69
CTNS-203ENST00000399306 RHOBTB3O94955 611 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 RPN1P04843 607 aaKnown RBP19.36■□□□□ 0.69
CTNS-203ENST00000399306 ITGA4P13612 1032 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 RABGGTBP53611 331 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 SNRPFP62306 86 aaKnown RBP19.36■□□□□ 0.69
CTNS-203ENST00000399306 POU5F1Q01860 360 aaKnown RBP19.36■□□□□ 0.69
CTNS-203ENST00000399306 MCL1Q07820 350 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 BMT2Q1RMZ1 405 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 SLFN12LQ6IEE8 588 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 GLB1LQ6UWU2 654 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 EPM2AIP1Q7L775 607 aaPredicted RBP19.36■□□□□ 0.69
CTNS-203ENST00000399306 GRAMD1CQ8IYS0 662 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 ABI1Q8IZP0 508 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 SPATA20Q8TB22 786 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 ZNF507Q8TCN5 953 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 CLP1Q92989 425 aaKnown RBP19.36■□□□□ 0.69
CTNS-203ENST00000399306 GSDMAQ96QA5 445 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 SLC28A3Q9HAS3 691 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 EXOC1Q9NV70 894 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 KANSL3Q9P2N6 904 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 YBX2Q9Y2T7 364 aaKnown RBP19.36■□□□□ 0.69
CTNS-203ENST00000399306 RALGAPA2Q2PPJ7 1873 aa19.36■□□□□ 0.69
CTNS-203ENST00000399306 SOX1O00570 391 aaPredicted RBP19.35■□□□□ 0.69
CTNS-203ENST00000399306 HNRNPDLO14979 420 aaKnown RBP19.35■□□□□ 0.69
CTNS-203ENST00000399306 CLDN3O15551 220 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 NPTXRO95502 500 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 CA3P07451 260 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 PBX2P40425 430 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 GRM5P41594 1212 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 LIG4P49917 911 aa19.35■□□□□ 0.69
CTNS-203ENST00000399306 FXR1P51114 621 aaKnown RBP eCLIP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms