RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 RPA1P27694 616 aa15.03■□□□□ -0
APOB-202ENST00000399256 PDE6BP35913 854 aa15.03■□□□□ -0
APOB-202ENST00000399256 CLUL1Q15846 466 aa15.03■□□□□ -0
APOB-202ENST00000399256 MFSD5Q6N075 450 aa15.03■□□□□ -0
APOB-202ENST00000399256 ETNPPLQ8TBG4 499 aa15.03■□□□□ -0
APOB-202ENST00000399256 CRAMP1Q96RY5 1269 aa15.03■□□□□ -0
APOB-202ENST00000399256 TAOK3Q9H2K8 898 aa15.03■□□□□ -0
APOB-202ENST00000399256 KIF9Q9HAQ2 790 aa15.03■□□□□ -0
APOB-202ENST00000399256 ARHGEF3Q9NR81 526 aa15.03■□□□□ -0
APOB-202ENST00000399256 ARL2BPQ9Y2Y0 163 aa15.03■□□□□ -0
APOB-202ENST00000399256 FTLP02792 175 aaPredicted RBP15.03■□□□□ -0
APOB-202ENST00000399256 ALAS1P13196 640 aa15.03■□□□□ -0
APOB-202ENST00000399256 GBP1P32455 592 aa15.03■□□□□ -0
APOB-202ENST00000399256 COILP38432 576 aaPredicted RBP15.03■□□□□ -0
APOB-202ENST00000399256 CAPRIN2Q6IMN6 1127 aaKnown RBP15.03■□□□□ -0
APOB-202ENST00000399256 RHOT2Q8IXI1 618 aa15.03■□□□□ -0
APOB-202ENST00000399256 IFT74Q96LB3 600 aa15.03■□□□□ -0
APOB-202ENST00000399256 P2RX7Q99572 595 aaKnown RBP15.03■□□□□ -0
APOB-202ENST00000399256 AGPAT1Q99943 283 aa15.03■□□□□ -0
APOB-202ENST00000399256 PCDHA1Q9Y5I3 950 aa15.03■□□□□ -0
APOB-202ENST00000399256 MPHOSPH10O00566 681 aaKnown RBP15.02■□□□□ -0
APOB-202ENST00000399256 HSPA6P17066 643 aa15.02■□□□□ -0
APOB-202ENST00000399256 LACTBP83111 547 aaPredicted RBP15.02■□□□□ -0
APOB-202ENST00000399256 TNIP1Q15025 636 aa15.02■□□□□ -0
APOB-202ENST00000399256 QRICH1Q2TAL8 776 aa15.02■□□□□ -0
APOB-202ENST00000399256 SEPT14Q6ZU15 432 aa15.02■□□□□ -0
APOB-202ENST00000399256 MYCT1Q8N699 235 aa15.02■□□□□ -0
APOB-202ENST00000399256 GBP7Q8N8V2 638 aaPredicted RBP15.02■□□□□ -0
APOB-202ENST00000399256 RDH13Q8NBN7 331 aa15.02■□□□□ -0
APOB-202ENST00000399256 PIGOQ8TEQ8 1089 aa15.02■□□□□ -0
APOB-202ENST00000399256 BTBD6Q96KE9 485 aa15.02■□□□□ -0
APOB-202ENST00000399256 RGL1Q9NZL6 768 aa15.02■□□□□ -0
APOB-202ENST00000399256 APEX2Q9UBZ4 518 aa15.02■□□□□ -0
APOB-202ENST00000399256 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.02■□□□□ -0
APOB-202ENST00000399256 FRMPD4Q14CM0 1322 aa15.02■□□□□ -0
APOB-202ENST00000399256 MIF4GDA9UHW6 222 aaKnown RBP15.02□□□□□ -0.01
APOB-202ENST00000399256 SMNDC1O75940 238 aaKnown RBP eCLIP15.02□□□□□ -0.018e-8■□□□□ 11.3
APOB-202ENST00000399256 GJB6O95452 261 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 SLURP2P0DP57 97 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 ATP2A2P16615 1042 aaKnown RBP15.02□□□□□ -0.01
APOB-202ENST00000399256 ARHGAP4P98171 946 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 ATP11AP98196 1134 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 MYL7Q01449 175 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 GRIK3Q13003 919 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 MPP2Q14168 576 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 ANKRD20A2Q5SQ80 823 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 ANKRD20A1Q5TYW2 823 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 ANKRD20A3Q5VUR7 823 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 PHLDB3Q6NSJ2 640 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 TPTE2Q6XPS3 522 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 SLC30A10Q6XR72 485 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 RUNDC3BQ96NL0 473 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 RXFP1Q9HBX9 757 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 PASKQ96RG2 1323 aa15.02□□□□□ -0.01
APOB-202ENST00000399256 IGKV6D-41A0A0C4DH26 115 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 CHKAP35790 457 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 SNAP25P60880 206 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 IRX1P78414 480 aaPredicted RBP15.01□□□□□ -0.01
APOB-202ENST00000399256 CALCOCO2Q13137 446 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 RRP1BQ14684 758 aaKnown RBP15.01□□□□□ -0.01
APOB-202ENST00000399256 MFSD14BQ5SR56 506 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 C11orf63Q6NUN7 778 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 TGS1Q96RS0 853 aaKnown RBP15.01□□□□□ -0.01
APOB-202ENST00000399256 RABGAP1Q9Y3P9 1069 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 FAM13AO94988 1023 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 HMGB2P26583 209 aaKnown RBP15.01□□□□□ -0.01
APOB-202ENST00000399256 PEX5P50542 639 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 MGAT5Q09328 741 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 ASRGL1Q7L266 308 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 CKAP2Q8WWK9 683 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 ROPN1BQ9BZX4 212 aaPredicted RBP15.01□□□□□ -0.01
APOB-202ENST00000399256 ROPN1Q9HAT0 212 aaPredicted RBP15.01□□□□□ -0.01
APOB-202ENST00000399256 CD209Q9NNX6 404 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 TBK1Q9UHD2 729 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 PLIN4Q96Q06 1357 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 CYP3A7-CYP3A51PA0A087WV96 503 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 TULP1O00294 542 aaPredicted RBP15.01□□□□□ -0.01
APOB-202ENST00000399256 DLATP10515 647 aaKnown RBP15.01□□□□□ -0.01
APOB-202ENST00000399256 CYP3A7P24462 503 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 SNX1Q13596 522 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 CGB2Q6NT52 195 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 ARMC2Q8NEN0 867 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 CNKSR1Q969H4 720 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.01□□□□□ -0.01
APOB-202ENST00000399256 AAASQ9NRG9 546 aa15.01□□□□□ -0.01
APOB-202ENST00000399256 EME2A4GXA9 379 aaPredicted RBP15□□□□□ -0.01
APOB-202ENST00000399256 FAM86B1E9PN63 330 aa15□□□□□ -0.01
APOB-202ENST00000399256 SLC26A4O43511 780 aa15□□□□□ -0.01
APOB-202ENST00000399256 UPP2O95045 317 aa15□□□□□ -0.01
APOB-202ENST00000399256 FAM86B2P0C5J1 330 aa15□□□□□ -0.01
APOB-202ENST00000399256 BRAFP15056 766 aa15□□□□□ -0.01
APOB-202ENST00000399256 TAL1P17542 331 aaPredicted RBP15□□□□□ -0.01
APOB-202ENST00000399256 KIF22Q14807 665 aa15□□□□□ -0.01
APOB-202ENST00000399256 CDCA2Q69YH5 1023 aaPredicted RBP15□□□□□ -0.01
APOB-202ENST00000399256 MIS18BP1Q6P0N0 1132 aa15□□□□□ -0.01
APOB-202ENST00000399256 SLC13A5Q86YT5 568 aaPredicted RBP15□□□□□ -0.01
APOB-202ENST00000399256 RPUSD2Q8IZ73 545 aaKnown RBP15□□□□□ -0.01
APOB-202ENST00000399256 ETNK1Q9HBU6 452 aa15□□□□□ -0.01
APOB-202ENST00000399256 MTUS1Q9ULD2 1270 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms