RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 TAS1R3Q7RTX0 852 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 THNSL1Q8IYQ7 743 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 CCDC51Q96ER9 411 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 REEP2Q9BRK0 252 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 TIPINQ9BVW5 301 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PDZD7Q9H5P4 517 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 AAASQ9NRG9 546 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 KCND2Q9NZV8 630 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 MYH15Q9Y2K3 1946 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 A0A087X0B3 334 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 NT5C1B-RDH14C9J2C7 533 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 B4GALT3O60512 393 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 ZC3H11AO75152 810 aaKnown RBP eCLIP15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PPP6R2O75170 966 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 FGF18O76093 207 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 YEATS4O95619 227 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 BRD1O95696 1058 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 POMCP01189 267 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 ITGA4P13612 1032 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 PLS3P13797 630 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 LAG3P18627 525 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 AKAP5P24588 427 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 NT5DC1Q5TFE4 455 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 EEF1DP3Q658K8 133 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 ZNF280BQ86YH2 543 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 POF1BQ8WVV4 589 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 ZFP42Q96MM3 310 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 MRPL9Q9BYD2 267 aaKnown RBP15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 GBP3Q9H0R5 595 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 C17orf75Q9HAS0 396 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 ARHGAP28Q9P2N2 729 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 CCDC39Q9UFE4 941 aa15.53■□□□□ 0.08
HLA-DQB1-202ENST00000399079 ARL5CA6NH57 179 aa15.52■□□□□ 0.07
HLA-DQB1-202ENST00000399079 IRS1P35568 1242 aa15.52■□□□□ 0.07
HLA-DQB1-202ENST00000399079 TXLNAP40222 546 aa15.52■□□□□ 0.07
HLA-DQB1-202ENST00000399079 MLH1P40692 756 aa15.52■□□□□ 0.07
HLA-DQB1-202ENST00000399079 RNASELQ05823 741 aaKnown RBP15.52■□□□□ 0.07
HLA-DQB1-202ENST00000399079 RRAGBQ5VZM2 374 aa15.52■□□□□ 0.07
HLA-DQB1-202ENST00000399079 PDILTQ8N807 584 aa15.52■□□□□ 0.07
HLA-DQB1-202ENST00000399079 CNNM3Q8NE01 707 aa15.52■□□□□ 0.07
HLA-DQB1-202ENST00000399079 ZNF558Q96NG5 402 aa15.52■□□□□ 0.07
HLA-DQB1-202ENST00000399079 GAD1Q99259 594 aa15.52■□□□□ 0.07
HLA-DQB1-202ENST00000399079 NTPCRQ9BSD7 190 aaKnown RBP15.52■□□□□ 0.07
HLA-DQB1-202ENST00000399079 NRDE2Q9H7Z3 1164 aa15.52■□□□□ 0.07
HLA-DQB1-202ENST00000399079 DNAJB4Q9UDY4 337 aa15.52■□□□□ 0.07
HLA-DQB1-202ENST00000399079 PCDHGC5Q9Y5F6 944 aa15.52■□□□□ 0.07
HLA-DQB1-202ENST00000399079 N4BP3O15049 544 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 DDHD2O94830 711 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 KRT18P05783 430 aaKnown RBP15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 ALDH7A1P49419 539 aaKnown RBP15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 BCAR1P56945 870 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 TFF2Q03403 129 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 GIT2Q14161 759 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 BECN1Q14457 450 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 TCEAL5Q5H9L2 206 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 ATF7IP2Q5U623 682 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 TMEM161BQ8NDZ6 487 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 SPIRE2Q8WWL2 714 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 LMAN2LQ9H0V9 348 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 TMEM134Q9H6X4 195 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 MIOSQ9NXC5 875 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 KLK14Q9P0G3 267 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 ODF2LQ9ULJ1 636 aa15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 RBM19Q9Y4C8 960 aaKnown RBP15.51■□□□□ 0.07
HLA-DQB1-202ENST00000399079 PHLPP2Q6ZVD8 1323 aa15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 SCNN1GP51170 649 aa15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 SMTNP53814 917 aa15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 AXDND1Q5T1B0 1012 aaPredicted RBP15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 SHC4Q6S5L8 630 aa15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 DYMQ7RTS9 669 aa15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 TMEM173Q86WV6 379 aaPredicted RBP15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 MYCT1Q8N699 235 aa15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 URGCPQ8TCY9 931 aa15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 TARS2Q9BW92 718 aaKnown RBP15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 ZHX3Q9H4I2 956 aa15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 NSUN3Q9H649 340 aaKnown RBP15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 LARSQ9P2J5 1176 aaKnown RBP15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 STK17AQ9UEE5 414 aa15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 PARP2Q9UGN5 583 aa15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 PCDHA7Q9UN72 937 aa15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 PLXNA4Q9HCM2 1894 aa15.5■□□□□ 0.07
HLA-DQB1-202ENST00000399079 CUTAO60888 179 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 FAM13AO94988 1023 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 GTF2F1P35269 517 aaKnown RBP eCLIP15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 STAT6P42226 847 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 ME1P48163 572 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 ZNF131P52739 623 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 ERVFC1P60507 584 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 CSPP1Q1MSJ5 1256 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 TIGD5Q53EQ6 642 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 SLC39A11Q8N1S5 342 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 GSTCDQ8NEC7 633 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 KCNG4Q8TDN1 519 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 ACO2Q99798 780 aaKnown RBP15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 ADPGKQ9BRR6 497 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 CXCL16Q9H2A7 254 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 PARVGQ9HBI0 331 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 UBN1Q9NPG3 1134 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 SNTG2Q9NY99 539 aa15.49■□□□□ 0.07
HLA-DQB1-202ENST00000399079 SPG21Q9NZD8 308 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms