RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 PCIF1Q9H4Z3 704 aa9.56□□□□□ -0.88
GIN1-201ENST00000399004 KIF9Q9HAQ2 790 aa9.56□□□□□ -0.88
GIN1-201ENST00000399004 TAS2R14Q9NYV8 317 aa9.56□□□□□ -0.88
GIN1-201ENST00000399004 SEL1LQ9UBV2 794 aa9.56□□□□□ -0.88
GIN1-201ENST00000399004 PPP1R9AQ9ULJ8 1098 aa9.56□□□□□ -0.88
GIN1-201ENST00000399004 TRAPPC3O43617 180 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 UCHL3P15374 230 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 GAP43P17677 238 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 HOXA13P31271 388 aaPredicted RBP9.55□□□□□ -0.88
GIN1-201ENST00000399004 SCNN1DP51172 638 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 SNRPFP62306 86 aaKnown RBP9.55□□□□□ -0.88
GIN1-201ENST00000399004 DR1Q01658 176 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 ZC2HC1CQ53FD0 456 aaPredicted RBP9.55□□□□□ -0.88
GIN1-201ENST00000399004 C1orf186Q6ZWK4 172 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 PALB2Q86YC2 1186 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 CCDC65Q8IXS2 484 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 CCDC26Q8TAB7 109 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 KLHL29Q96CT2 875 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 TXLNGYQ9BZA5 131 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 USP40Q9NVE5 1235 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 AMFRQ9UKV5 643 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 TCP11X1B4DZS4 312 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 RFX1P22670 979 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 ZNF76P36508 570 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 GALCP54803 685 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 COG2Q14746 738 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 PRUNE1Q86TP1 453 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 VPS36Q86VN1 386 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 ZBTB10Q96DT7 871 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 XPO6Q96QU8 1125 aaKnown RBP9.55□□□□□ -0.88
GIN1-201ENST00000399004 PPP1R12CQ9BZL4 782 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 TRIM6Q9C030 488 aaPredicted RBP9.55□□□□□ -0.88
GIN1-201ENST00000399004 ZCWPW1Q9H0M4 648 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 ISCUQ9H1K1 167 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 TYW1Q9NV66 732 aaKnown RBP9.55□□□□□ -0.88
GIN1-201ENST00000399004 NAGPAQ9UK23 515 aa9.55□□□□□ -0.88
GIN1-201ENST00000399004 IGSF9BQ9UPX0 1349 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 IGF2BP3O00425 579 aaKnown RBP eCLIP9.54□□□□□ -0.88
GIN1-201ENST00000399004 MTA2O94776 668 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 ANP32DO95626 131 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 HSD17B4P51659 736 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 GTF2IP78347 998 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 ARHGAP4P98171 946 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 BIRC2Q13490 618 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 KNOP1Q1ED39 458 aaKnown RBP9.54□□□□□ -0.88
GIN1-201ENST00000399004 CYP4F22Q6NT55 531 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 TMC3Q7Z5M5 1100 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 ZFPM1Q8IX07 1006 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 LMO3Q8TAP4 145 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 MIEF2Q96C03 454 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.54□□□□□ -0.88
GIN1-201ENST00000399004 DDX23Q9BUQ8 820 aaKnown RBP9.54□□□□□ -0.88
GIN1-201ENST00000399004 MAP3K20Q9NYL2 800 aaKnown RBP9.54□□□□□ -0.88
GIN1-201ENST00000399004 DONSONQ9NYP3 566 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 RGL1Q9NZL6 768 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 HERC5Q9UII4 1024 aaKnown RBP9.54□□□□□ -0.88
GIN1-201ENST00000399004 KIAA1217Q5T5P2 1943 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 KAT6AQ92794 2004 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 WDR91A4D1P6 747 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 DDTLA6NHG4 134 aaPredicted RBP9.54□□□□□ -0.88
GIN1-201ENST00000399004 A6NNZ2 444 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 FAM86B1E9PN63 330 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 TGFB1I1O43294 461 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 EVI5O60447 810 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 FLOT1O75955 427 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 ATP6V1G2O95670 118 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 GH1P01241 217 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 HLA-DOAP06340 250 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 VIL1P09327 827 aaKnown RBP9.54□□□□□ -0.88
GIN1-201ENST00000399004 FAM86B2P0C5J1 330 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 EEF2P13639 858 aaKnown RBP9.54□□□□□ -0.88
GIN1-201ENST00000399004 JAG1P78504 1218 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 NFIAQ12857 509 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 TRAF1Q13077 416 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 GNPTABQ3T906 1256 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 TUBB8Q3ZCM7 444 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 OTOP1Q7RTM1 612 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
GIN1-201ENST00000399004 AGAP11Q8TF27 550 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 BHMT2Q9H2M3 363 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 METTL14Q9HCE5 456 aaKnown RBP9.54□□□□□ -0.88
GIN1-201ENST00000399004 ASIC3Q9UHC3 531 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 MCM8Q9UJA3 840 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 GGA2Q9UJY4 613 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 RABGAP1Q9Y3P9 1069 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 OTOFQ9HC10 1997 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 F8VZ95 297 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 C6orf229H3BNL8 230 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 MSH4O15457 936 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 SPOPO43791 374 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 ELF3P78545 371 aaPredicted RBP9.54□□□□□ -0.88
GIN1-201ENST00000399004 RRP1BQ14684 758 aaKnown RBP9.54□□□□□ -0.88
GIN1-201ENST00000399004 SLC35G2Q8TBE7 412 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 C1orf54Q8WWF1 131 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 SLC35C1Q96A29 364 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 ARHGEF26Q96DR7 871 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 TMEM237Q96Q45 408 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 AMNQ9BXJ7 453 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 ECT2Q9H8V3 914 aa9.54□□□□□ -0.88
GIN1-201ENST00000399004 AGAP1Q9UPQ3 857 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms