RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 GADL1Q6ZQY3 521 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 ASRGL1Q7L266 308 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 TRMT1LQ7Z2T5 733 aaKnown RBP10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 SPATA21Q7Z572 469 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 TRIM74Q86UV6 250 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 TRIM73Q86UV7 250 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 REXO1Q8N1G1 1221 aaKnown RBP10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 ACTRT1Q8TDG2 376 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 DCAF4Q8WV16 495 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 ZMYND12Q9H0C1 365 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 DDX47Q9H0S4 455 aaKnown RBP10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 LMCD1Q9NZU5 365 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 USP15Q9Y4E8 981 aaPredicted RBP10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 SLC37A4O43826 429 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 SORBS3O60504 671 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 PPFIA2O75334 1257 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 GBP1P32455 592 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 PCK1P35558 622 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 GJA5P36382 358 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 PDIA5Q14554 519 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 SLC9C1Q4G0N8 1177 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 SPDYCQ5MJ68 293 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 USP50Q70EL3 339 aaPredicted RBP10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 FBXO11Q86XK2 927 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 SYT15Q9BQS2 421 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 PLCD4Q9BRC7 762 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 TRIM4Q9C037 500 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 ZCWPW1Q9H0M4 648 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 FAM114A2Q9NRY5 505 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 KBTBD4Q9NVX7 518 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 CHCHD3Q9NX63 227 aaKnown RBP10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 ATP8A1Q9Y2Q0 1164 aa10.91□□□□□ -0.66
HMGCLL1-205ENST00000398661 CCDC188H7C350 402 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 MEIS2O14770 477 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 CELF2O95319 508 aaKnown RBP10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 PDHA1P08559 390 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 ATP6V1C1P21283 382 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 PDE6CP51160 858 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 ADCY7P51828 1080 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 PDE4DQ08499 809 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 CUL3Q13618 768 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 MAN2A1Q16706 1144 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 KCTD19Q17RG1 926 aaPredicted RBP10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 CMPK2Q5EBM0 449 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 C4orf32Q8N8J7 132 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 FAM81AQ8TBF8 368 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 FBF1Q8TES7 1133 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 PGM2Q96G03 612 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 TXLNGYQ9BZA5 131 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 EDEM3Q9BZQ6 932 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 PKD2L1Q9P0L9 805 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 AMACRQ9UHK6 382 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 ZNF112Q9UJU3 913 aa10.9□□□□□ -0.66
HMGCLL1-205ENST00000398661 A0A1B0GVG6 124 aa10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 PGRMC1O00264 195 aaKnown RBP10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 SERPING1P05155 500 aa10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 IFNAR2P48551 515 aa10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 STK4Q13043 487 aa10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 LDHDQ86WU2 507 aa10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 SEC14L1Q92503 715 aa10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 OPTNQ96CV9 577 aa10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 RBM41Q96IZ5 413 aaKnown RBP10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 DPH5Q9H2P9 285 aa10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 AZI2Q9H6S1 392 aa10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 NKX1-2Q9UD57 310 aaPredicted RBP10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 PNMA3Q9UL41 463 aa10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 TRIM33Q9UPN9 1127 aa10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 AFG3L2Q9Y4W6 797 aa10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 CSADQ9Y600 493 aa10.9□□□□□ -0.67
HMGCLL1-205ENST00000398661 ZNF536O15090 1300 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 TLDC2A0PJX2 215 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 IQCA1LA6NCM1 817 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 KRIT1O00522 736 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 TTI1O43156 1089 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 COQ9O75208 318 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 SUN1O94901 812 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 CYP2C8P10632 490 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 PYGBP11216 843 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 PPP1R2P41236 205 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 USP11P51784 963 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 SFMBT2Q5VUG0 894 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 TMEM154Q6P9G4 183 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 BICD1Q96G01 975 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 LZTS2Q9BRK4 669 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 KIAA1683Q9H0B3 1180 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 SLITRK6Q9H5Y7 841 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 C6orf50Q9HD87 102 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 CCPG1Q9ULG6 757 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 NOC2LQ9Y3T9 749 aaKnown RBP10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 COL2A1P02458 1487 aaPredicted RBP10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 ATAD5Q96QE3 1844 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 CCDC169A6NNP5 214 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 E7ENQ6 273 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 RGS16O15492 202 aaPredicted RBP10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 NUDT17P0C025 328 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 FCER1AP12319 257 aa10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 SP100P23497 879 aaPredicted RBP10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 IFI35P80217 286 aaPredicted RBP10.89□□□□□ -0.67
HMGCLL1-205ENST00000398661 CST9Q5W186 159 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms