RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 PDZD7Q9H5P4 517 aa14.08□□□□□ -0.16
VPREB3-202ENST00000398465 TMEM134Q9H6X4 195 aa14.08□□□□□ -0.16
VPREB3-202ENST00000398465 ALG13Q9NP73 1137 aaKnown RBP14.08□□□□□ -0.16
VPREB3-202ENST00000398465 BLOC1S4Q9NUP1 217 aa14.08□□□□□ -0.16
VPREB3-202ENST00000398465 KANSL3Q9P2N6 904 aa14.08□□□□□ -0.16
VPREB3-202ENST00000398465 CCDC39Q9UFE4 941 aa14.08□□□□□ -0.16
VPREB3-202ENST00000398465 GIT1Q9Y2X7 761 aa14.08□□□□□ -0.16
VPREB3-202ENST00000398465 RBM19Q9Y4C8 960 aaKnown RBP14.08□□□□□ -0.16
VPREB3-202ENST00000398465 MYO7AQ13402 2215 aa14.08□□□□□ -0.16
VPREB3-202ENST00000398465 TCHHQ07283 1943 aa14.07□□□□□ -0.16
VPREB3-202ENST00000398465 FSD2A1L4K1 749 aa14.07□□□□□ -0.16
VPREB3-202ENST00000398465 H0YCG3 227 aa14.07□□□□□ -0.16
VPREB3-202ENST00000398465 PLS3P13797 630 aa14.07□□□□□ -0.16
VPREB3-202ENST00000398465 CAMK1Q14012 370 aa14.07□□□□□ -0.16
VPREB3-202ENST00000398465 SKIV2LQ15477 1246 aaKnown RBP14.07□□□□□ -0.16
VPREB3-202ENST00000398465 AAK1Q2M2I8 961 aa14.07□□□□□ -0.16
VPREB3-202ENST00000398465 PDE12Q6L8Q7 609 aaKnown RBP14.07□□□□□ -0.16
VPREB3-202ENST00000398465 GPBP1Q86WP2 473 aa14.07□□□□□ -0.16
VPREB3-202ENST00000398465 SLC39A11Q8N1S5 342 aa14.07□□□□□ -0.16
VPREB3-202ENST00000398465 LRRC15Q8TF66 581 aa14.07□□□□□ -0.16
VPREB3-202ENST00000398465 MRPS27Q92552 414 aaKnown RBP14.07□□□□□ -0.16
VPREB3-202ENST00000398465 NTPCRQ9BSD7 190 aaKnown RBP14.07□□□□□ -0.16
VPREB3-202ENST00000398465 NXF3Q9H4D5 531 aaKnown RBP14.07□□□□□ -0.16
VPREB3-202ENST00000398465 KMT5AQ9NQR1 393 aa14.07□□□□□ -0.16
VPREB3-202ENST00000398465 TLR9Q9NR96 1032 aa14.07□□□□□ -0.16
VPREB3-202ENST00000398465 LARSQ9P2J5 1176 aaKnown RBP14.07□□□□□ -0.16
VPREB3-202ENST00000398465 INPP5FQ9Y2H2 1132 aa14.07□□□□□ -0.16
VPREB3-202ENST00000398465 CUL9Q8IWT3 2517 aa14.07□□□□□ -0.16
VPREB3-202ENST00000398465 VCANP13611 3396 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 CCDC169A6NNP5 214 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 K7ERI5 159 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 SPTLC2O15270 562 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 NCK2O43639 380 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 ZC3H11AO75152 810 aaKnown RBP eCLIP14.06□□□□□ -0.16
VPREB3-202ENST00000398465 NPTXRO95502 500 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 EDN1P05305 212 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 DNAJB1P25685 340 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 MLH1P40692 756 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 ALDH7A1P49419 539 aaKnown RBP14.06□□□□□ -0.16
VPREB3-202ENST00000398465 ZNF131P52739 623 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 SMTNP53814 917 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 BCAR1P56945 870 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 RNASELQ05823 741 aaKnown RBP14.06□□□□□ -0.16
VPREB3-202ENST00000398465 BECN1Q14457 450 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 TMEM132AQ24JP5 1023 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 ARSHQ5FYA8 562 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 TCEAL5Q5H9L2 206 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 CCDC73Q6ZRK6 1079 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 KCNG4Q8TDN1 519 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 HLA-CQ95604 372 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 EPSTI1Q96J88 318 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 REEP2Q9BRK0 252 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 TMEM175Q9BSA9 504 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 MRPL4Q9BYD3 311 aaKnown RBP14.06□□□□□ -0.16
VPREB3-202ENST00000398465 PRDM6Q9NQX0 595 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 SPG21Q9NZD8 308 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 STK39Q9UEW8 545 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 TNFSF13BQ9Y275 285 aa14.06□□□□□ -0.16
VPREB3-202ENST00000398465 ARL5CA6NH57 179 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 FSCN2O14926 492 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 ABCD1P33897 745 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 NCKAP1LP55160 1127 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 MRPS5P82675 430 aaKnown RBP14.05□□□□□ -0.16
VPREB3-202ENST00000398465 KRT17Q04695 432 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 GRIK3Q13003 919 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 PKP1Q13835 747 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 LONRF3Q496Y0 759 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 TJAP1Q5JTD0 557 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 ATF7IP2Q5U623 682 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 USP49Q70CQ1 688 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 PABPC5Q96DU9 382 aaKnown RBP14.05□□□□□ -0.16
VPREB3-202ENST00000398465 TMEM169Q96HH4 297 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 CLIC6Q96NY7 704 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 NRDE2Q9H7Z3 1164 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 UBE2ZQ9H832 354 aaPredicted RBP14.05□□□□□ -0.16
VPREB3-202ENST00000398465 PARVGQ9HBI0 331 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 PUF60Q9UHX1 559 aaKnown RBP14.05□□□□□ -0.16
VPREB3-202ENST00000398465 HES2Q9Y543 173 aa14.05□□□□□ -0.16
VPREB3-202ENST00000398465 ANK1P16157 1881 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 TTLL13PA6NNM8 815 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 CUTAO60888 179 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 TBCAO75347 108 aaKnown RBP14.04□□□□□ -0.16
VPREB3-202ENST00000398465 FAM13AO94988 1023 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 MAPTP10636 758 aaKnown RBP14.04□□□□□ -0.16
VPREB3-202ENST00000398465 IRS1P35568 1242 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 PBX3P40426 434 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 DSC1Q08554 894 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 RAD51AP2Q09MP3 1159 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 STRN3Q13033 797 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 MCM6Q14566 821 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 ZNF568Q3ZCX4 644 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 SPECC1Q5M775 1068 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 RRAGBQ5VZM2 374 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 ZPBP2Q6X784 338 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 TAS1R3Q7RTX0 852 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 CDR2LQ86X02 465 aaPredicted RBP14.04□□□□□ -0.16
VPREB3-202ENST00000398465 TMEM161BQ8NDZ6 487 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 ASB2Q96Q27 587 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 RPS6KC1Q96S38 1066 aa14.04□□□□□ -0.16
VPREB3-202ENST00000398465 GAD1Q99259 594 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms