RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 NT5DC3Q86UY8 548 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 IL31RAQ8NI17 732 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 ATG4AQ8WYN0 398 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 POMGNT1Q8WZA1 660 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 KRT35Q92764 455 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 GLG1Q92896 1179 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 RNF146Q9NTX7 359 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 VAV3Q9UKW4 847 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 FMN2Q9NZ56 1722 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 FRMD3A2A2Y4 597 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 PHF2O75151 1096 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 GJB6O95452 261 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 QARSP47897 775 aaKnown RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 OSTNP61366 133 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 KRT17Q04695 432 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 HYIQ5T013 277 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 NOP9Q86U38 636 aaKnown RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 EPS8L3Q8TE67 593 aaKnown RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 TACO1Q9BSH4 297 aaKnown RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 CD248Q9HCU0 757 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 NEUROD4Q9HD90 331 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 C1orf112Q9NSG2 853 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 NKIRAS1Q9NYS0 192 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 ANKFY1Q9P2R3 1169 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 PCDHA2Q9Y5H9 948 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 KAT6AQ92794 2004 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 ADRB2P07550 413 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 MMEP08473 750 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 POLD1P28340 1107 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 CIITAP33076 1130 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 PIK3CAP42336 1068 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 DYNLT1P63172 113 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 HIBCHQ6NVY1 386 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 MMS22LQ6ZRQ5 1243 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 PRUNE1Q86TP1 453 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 GMCL1P1Q8NEA9 526 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 JDP2Q8WYK2 163 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 ZSWIM1Q9BR11 485 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 KCNH7Q9NS40 1196 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 WRAP73Q9P2S5 460 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 PARP2Q9UGN5 583 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 ODF2LQ9ULJ1 636 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 NR2E1Q9Y466 385 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 HNRNPDLO14979 420 aaKnown RBP5.28□□□□□ -1.56
SMAD4-202ENST00000398417 ACSL3O95573 720 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 PPP3CAQ08209 521 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 CCDC137Q6PK04 289 aaKnown RBP5.28□□□□□ -1.56
SMAD4-202ENST00000398417 C1orf186Q6ZWK4 172 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 ACTRT1Q8TDG2 376 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 MAIP1Q8WWC4 291 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 CYFIP2Q96F07 1278 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 SH3GL2Q99962 352 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 EFCC1Q9HA90 598 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 ZNF148Q9UQR1 794 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 CYP3A7-CYP3A51PA0A087WV96 503 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 LRRIQ4A6NIV6 560 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 A6NNZ2 444 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 SPAG7O75391 227 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 SHBGP04278 402 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 SP100P23497 879 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-202ENST00000398417 CYP3A7P24462 503 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 PSMC5P62195 406 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 AGERQ15109 404 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 TUBB8Q3ZCM7 444 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 KRT39Q6A163 491 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 CIAPIN1Q6FI81 312 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 SPOPLQ6IQ16 392 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 INTS8Q75QN2 995 aaKnown RBP5.28□□□□□ -1.56
SMAD4-202ENST00000398417 HVCN1Q96D96 273 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 ATG4CQ96DT6 458 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 ZDHHC15Q96MV8 337 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-202ENST00000398417 MIF4GDA9UHW6 222 aaKnown RBP5.28□□□□□ -1.56
SMAD4-202ENST00000398417 LSP1P33241 339 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 HP1BP3Q5SSJ5 553 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-202ENST00000398417 AGBL2Q5U5Z8 902 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 GKAP1Q5VSY0 366 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-202ENST00000398417 HHATQ5VTY9 493 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 THNSL1Q8IYQ7 743 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 PAGR1Q9BTK6 254 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 ZWILCHQ9H900 591 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 SLC40A1Q9NP59 571 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 SH3BP5O60239 455 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 RTN2O75298 545 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 CYP3A4P08684 503 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 CAP2P40123 477 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 MARSP56192 900 aaKnown RBP5.28□□□□□ -1.56
SMAD4-202ENST00000398417 QPCTQ16769 361 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 SLC27A3Q5K4L6 730 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 ICE2Q659A1 982 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 SLC5A5Q92911 643 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 TBC1D31Q96DN5 1066 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 CALR3Q96L12 384 aaKnown RBP5.28□□□□□ -1.56
SMAD4-202ENST00000398417 PDCD2LQ9BRP1 358 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 MKNK1Q9BUB5 465 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 PLVAPQ9BX97 442 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 IDI2Q9BXS1 227 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 ANAPC7Q9UJX3 599 aa5.28□□□□□ -1.56
SMAD4-202ENST00000398417 PCDHGC5Q9Y5F6 944 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms