RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 PSMC5P62195 406 aa17.46■□□□□ 0.39
CTDSP2-201ENST00000398073 MDM2Q00987 491 aaPredicted RBP17.46■□□□□ 0.39
CTDSP2-201ENST00000398073 PPP2R5CQ13362 524 aa17.46■□□□□ 0.39
CTDSP2-201ENST00000398073 GOLPH3Q9H4A6 298 aa17.46■□□□□ 0.39
CTDSP2-201ENST00000398073 NFIXQ14938 502 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 ATP11CQ8NB49 1132 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 TPCN2Q8NHX9 752 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 MED10Q9BTT4 135 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 CELF4Q9BZC1 486 aaKnown RBP17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 KLC2Q9H0B6 622 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 SEMA6BQ9H3T3 888 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 EIF3DO15371 548 aaKnown RBP eCLIP17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 RAD17O75943 681 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 MYCBPAPQ8TBZ2 947 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 FAF2Q96CS3 445 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 ROPN1BQ9BZX4 212 aaPredicted RBP17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 ROPN1Q9HAT0 212 aaPredicted RBP17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 CLEC11AQ9Y240 323 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 ALG6Q9Y672 507 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 GNA15P30679 374 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 CDR2Q01850 454 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 ZNF394Q53GI3 561 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 CLEC10AQ8IUN9 316 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 MAP2K7O14733 419 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 HNRNPH1P31943 449 aaKnown RBP17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 MMEL1Q495T6 779 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 CAVIN3Q969G5 261 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 DDX23Q9BUQ8 820 aaKnown RBP17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 NYAP2Q9P242 653 aa17.45■□□□□ 0.38
CTDSP2-201ENST00000398073 CLDN3O15551 220 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 ZWINTO95229 277 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 IGBP1P78318 339 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 PDIA2Q13087 525 aaKnown RBP17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 ZNF667Q5HYK9 610 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 ZBED8Q8IZ13 594 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 CCNYQ8ND76 341 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 MID2Q9UJV3 735 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 TRPC5Q9UL62 973 aaPredicted RBP17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 SPECC1L-ADORA2AF8WAN1 911 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 EARS2Q5JPH6 523 aaKnown RBP17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 RAPH1Q70E73 1250 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 SH3RF1Q7Z6J0 888 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 DCTN4Q9UJW0 460 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 KRT7P08729 469 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 TRPM8Q7Z2W7 1104 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 PFDN4Q9NQP4 134 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 THEGQ9P2T0 379 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 EPS15L1Q9UBC2 864 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 FAM205AQ6ZU69 1335 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 GPR75-ASB3A0A0A6YYF3 556 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 XPOTO43592 962 aaKnown RBP17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 SLC37A4O43826 429 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 ARFIP2P53365 341 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 PLCB4Q15147 1175 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 GSDMBQ8TAX9 411 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 TSC22D3Q99576 134 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 UBE4BO95155 1302 aa17.44■□□□□ 0.38
CTDSP2-201ENST00000398073 A0A087X0B3 334 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 CCT8L1PA6NM43 557 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 GOLGA8MH3BSY2 632 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 POLE2P56282 527 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 EZH2Q15910 746 aaKnown RBP17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 SP8Q8IXZ3 490 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 DNAAF3Q8N9W5 541 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 SGSM3Q96HU1 749 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 TIPINQ9BVW5 301 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 SYNJ2BP-COX16A0A087WUM0 186 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 CYP11B2P19099 503 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 PMS1P54277 932 aaKnown RBP17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 OSTNP61366 133 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 COG7P83436 770 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 DEPDC1BQ8WUY9 529 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 HSPH1Q92598 858 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 SLC38A10Q9HBR0 1119 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 NGRNQ9NPE2 291 aaKnown RBP17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 HSPBP1Q9NZL4 362 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 COX16Q9P0S2 106 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 SMG5Q9UPR3 1016 aaKnown RBP17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 PRPSAP1Q14558 356 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 ZC3H18Q86VM9 953 aaKnown RBP17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 GPD1LQ8N335 351 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 TBC1D16Q8TBP0 767 aa17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 RPF1Q9H9Y2 349 aaKnown RBP17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 DDX56Q9NY93 547 aaKnown RBP17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 HERC5Q9UII4 1024 aaKnown RBP17.43■□□□□ 0.38
CTDSP2-201ENST00000398073 DCAF8L1A6NGE4 600 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 ECM2O94769 699 aaPredicted RBP17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 RC3H1Q5TC82 1133 aaKnown RBP17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 KCNV2Q8TDN2 545 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 HEXIM2Q96MH2 286 aaKnown RBP17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 SLC40A1Q9NP59 571 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 INTS13Q9NVM9 706 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 TLK1Q9UKI8 766 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 NDUFB10O96000 172 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 COMTP21964 271 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 LONRF1Q17RB8 773 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 FOXP3Q9BZS1 431 aa17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 PABPC3Q9H361 631 aaKnown RBP17.42■□□□□ 0.38
CTDSP2-201ENST00000398073 DBR1Q9UK59 544 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms