RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 CALML4Q96GE6 196 aa18.43■□□□□ 0.54
APTR-201ENST00000398043 DRC1Q96MC2 740 aa18.43■□□□□ 0.54
APTR-201ENST00000398043 ZNF558Q96NG5 402 aa18.43■□□□□ 0.54
APTR-201ENST00000398043 ASB2Q96Q27 587 aa18.43■□□□□ 0.54
APTR-201ENST00000398043 NXF3Q9H4D5 531 aaKnown RBP18.43■□□□□ 0.54
APTR-201ENST00000398043 LZTS1Q9Y250 596 aa18.43■□□□□ 0.54
APTR-201ENST00000398043 SPTBN5Q9NRC6 3674 aaKnown RBP18.43■□□□□ 0.54
APTR-201ENST00000398043 NPHP3-ACAD11A0A0J9YXS1 232 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 SFI1A8K8P3 1242 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 F13A1P00488 732 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 ITGA4P13612 1032 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 BCAR1P56945 870 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 ERVFC1P60507 584 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 MRPS5P82675 430 aaKnown RBP18.42■□□□□ 0.54
APTR-201ENST00000398043 HYAL1Q12794 435 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 PRPF4BQ13523 1007 aaKnown RBP18.42■□□□□ 0.54
APTR-201ENST00000398043 ZNF280BQ86YH2 543 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 THNSL1Q8IYQ7 743 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 GSTCDQ8NEC7 633 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 MRPS27Q92552 414 aaKnown RBP18.42■□□□□ 0.54
APTR-201ENST00000398043 RAD54LQ92698 747 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 SYMPKQ92797 1274 aaKnown RBP18.42■□□□□ 0.54
APTR-201ENST00000398043 KCNN1Q92952 543 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 TMEM134Q9H6X4 195 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 UBN1Q9NPG3 1134 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 MIOSQ9NXC5 875 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 SPG21Q9NZD8 308 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 DNAJB4Q9UDY4 337 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 INPP5FQ9Y2H2 1132 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 PCDHGC5Q9Y5F6 944 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 ZMYM2Q9UBW7 1377 aa18.42■□□□□ 0.54
APTR-201ENST00000398043 ARL5CA6NH57 179 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 N4BP3O15049 544 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 DDHD2O94830 711 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 NPTXRO95502 500 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 SSBP05455 408 aaKnown RBP eCLIP18.41■□□□□ 0.54
APTR-201ENST00000398043 HSP90AA1P07900 732 aaKnown RBP18.41■□□□□ 0.54
APTR-201ENST00000398043 GALTP07902 379 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 PLS3P13797 630 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 PPM1AP35813 382 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 RAD51AP2Q09MP3 1159 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 DMP1Q13316 513 aaPredicted RBP18.41■□□□□ 0.54
APTR-201ENST00000398043 MCM6Q14566 821 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 SKIV2LQ15477 1246 aaKnown RBP18.41■□□□□ 0.54
APTR-201ENST00000398043 CTC1Q2NKJ3 1217 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 EEF1DP3Q658K8 133 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 ADGRD2Q7Z7M1 963 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 TMEM173Q86WV6 379 aaPredicted RBP18.41■□□□□ 0.54
APTR-201ENST00000398043 SPRYD3Q8NCJ5 442 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 SPIRE2Q8WWL2 714 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 KANSL3Q9P2N6 904 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 TFIP11Q9UBB9 837 aaKnown RBP18.41■□□□□ 0.54
APTR-201ENST00000398043 GIT1Q9Y2X7 761 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 PHLPP2Q6ZVD8 1323 aa18.41■□□□□ 0.54
APTR-201ENST00000398043 ANK1P16157 1881 aa18.4■□□□□ 0.54
APTR-201ENST00000398043 CCDC169A6NNP5 214 aa18.4■□□□□ 0.54
APTR-201ENST00000398043 K7ERI5 159 aa18.4■□□□□ 0.54
APTR-201ENST00000398043 GTF2F1P35269 517 aaKnown RBP eCLIP18.4■□□□□ 0.54
APTR-201ENST00000398043 LTBRP36941 435 aa18.4■□□□□ 0.54
APTR-201ENST00000398043 ZNF131P52739 623 aa18.4■□□□□ 0.54
APTR-201ENST00000398043 DSC1Q08554 894 aa18.4■□□□□ 0.54
APTR-201ENST00000398043 TJAP1Q5JTD0 557 aa18.4■□□□□ 0.54
APTR-201ENST00000398043 KRI1Q8N9T8 703 aaKnown RBP18.4■□□□□ 0.54
APTR-201ENST00000398043 BCL7CQ8WUZ0 217 aaPredicted RBP18.4■□□□□ 0.54
APTR-201ENST00000398043 PABPC5Q96DU9 382 aaKnown RBP18.4■□□□□ 0.54
APTR-201ENST00000398043 ZFP42Q96MM3 310 aa18.4■□□□□ 0.54
APTR-201ENST00000398043 GAD1Q99259 594 aa18.4■□□□□ 0.54
APTR-201ENST00000398043 REEP2Q9BRK0 252 aa18.4■□□□□ 0.54
APTR-201ENST00000398043 UBE2ZQ9H832 354 aaPredicted RBP18.4■□□□□ 0.54
APTR-201ENST00000398043 PTPRHQ9HD43 1115 aa18.4■□□□□ 0.54
APTR-201ENST00000398043 TLR9Q9NR96 1032 aa18.4■□□□□ 0.54
APTR-201ENST00000398043 ODF2LQ9ULJ1 636 aa18.4■□□□□ 0.54
APTR-201ENST00000398043 RBM19Q9Y4C8 960 aaKnown RBP18.4■□□□□ 0.54
APTR-201ENST00000398043 VWA8A3KMH1 1905 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 A0A087X0B3 334 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 NT5C1B-RDH14C9J2C7 533 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 ABLIM1O14639 778 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 SLC16A4O15374 487 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 ZC3H11AO75152 810 aaKnown RBP eCLIP18.39■□□□□ 0.53
APTR-201ENST00000398043 PPP6R2O75170 966 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 BMP1P13497 986 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 AKAP5P24588 427 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 DDIT3P35638 169 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 MLH1P40692 756 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 SLC11A1P49279 550 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 ALDH7A1P49419 539 aaKnown RBP18.39■□□□□ 0.53
APTR-201ENST00000398043 KCNQ1P51787 676 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 CACNB1Q02641 598 aaPredicted RBP18.39■□□□□ 0.53
APTR-201ENST00000398043 GIT2Q14161 759 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 FOXD4L5Q5VV16 416 aaPredicted RBP18.39■□□□□ 0.53
APTR-201ENST00000398043 GPBP1Q86WP2 473 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 COLGALT2Q8IYK4 626 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 TMEM161BQ8NDZ6 487 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 URGCPQ8TCY9 931 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 FOXD4L4Q8WXT5 416 aaPredicted RBP18.39■□□□□ 0.53
APTR-201ENST00000398043 LARP4BQ92615 738 aaKnown RBP18.39■□□□□ 0.53
APTR-201ENST00000398043 ACO2Q99798 780 aaKnown RBP18.39■□□□□ 0.53
APTR-201ENST00000398043 VN1R3Q9BXE9 311 aa18.39■□□□□ 0.53
APTR-201ENST00000398043 COL25A1Q9BXS0 654 aaPredicted RBP18.39■□□□□ 0.53
APTR-201ENST00000398043 TRIM6Q9C030 488 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms