RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ANO5Q75V66 913 aa19.8■□□□□ 0.76
CHRFAM7A-202ENST00000397827 JDP2Q8WYK2 163 aa19.8■□□□□ 0.76
CHRFAM7A-202ENST00000397827 TMOD4Q9NZQ9 345 aa19.8■□□□□ 0.76
CHRFAM7A-202ENST00000397827 SGPL1O95470 568 aa19.8■□□□□ 0.76
CHRFAM7A-202ENST00000397827 FLT3P36888 993 aa19.8■□□□□ 0.76
CHRFAM7A-202ENST00000397827 GNGT1P63211 74 aa19.8■□□□□ 0.76
CHRFAM7A-202ENST00000397827 BAATQ14032 418 aaPredicted RBP19.8■□□□□ 0.76
CHRFAM7A-202ENST00000397827 MAATS1Q7Z4T9 603 aa19.8■□□□□ 0.76
CHRFAM7A-202ENST00000397827 FMNL3Q8IVF7 1028 aa19.8■□□□□ 0.76
CHRFAM7A-202ENST00000397827 PPM1KQ8N3J5 372 aa19.8■□□□□ 0.76
CHRFAM7A-202ENST00000397827 RNPC3Q96LT9 517 aaKnown RBP19.8■□□□□ 0.76
CHRFAM7A-202ENST00000397827 PLAAQ9Y263 795 aa19.8■□□□□ 0.76
CHRFAM7A-202ENST00000397827 TELO2Q9Y4R8 837 aa19.8■□□□□ 0.76
CHRFAM7A-202ENST00000397827 CTNND1O60716 968 aaKnown RBP19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 ZBED4O75132 1171 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 HSPA9P38646 679 aaKnown RBP19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 NCKAP1LP55160 1127 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 CUL1Q13616 776 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 SNRNP35Q16560 246 aaKnown RBP19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 AADACL2Q6P093 401 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 DEFB132Q7Z7B7 95 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 ALG3Q92685 438 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 VPS33BQ9H267 617 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 CTTNBP2NLQ9P2B4 639 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 TMEM110-MUSTN1A8MSY1 372 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 VWA5AO00534 786 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 PPFIA4O75335 1185 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 NPTX2P47972 431 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 SP4Q02446 784 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 NBPF12Q5TAG4 269 aaPredicted RBP19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 OR2W6PQ8NHA6 318 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 SEMA4DQ92854 862 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 TRIM31Q9BZY9 425 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 DPH5Q9H2P9 285 aa19.79■□□□□ 0.76
CHRFAM7A-202ENST00000397827 ATMINO43313 823 aaPredicted RBP19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 SORBS3O60504 671 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 CNGA1P29973 690 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 TNFAIP1Q13829 316 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 TMEM161BQ8NDZ6 487 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 KAT2BQ92831 832 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 KREMEN1Q96MU8 473 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 PCDHB18PQ96TA0 734 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 ST6GALNAC4Q9H4F1 302 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 RNF146Q9NTX7 359 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 TBX20Q9UMR3 447 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 ALG6Q9Y672 507 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 GRIN2DO15399 1336 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 P4HA2O15460 535 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 CYP26A1O43174 497 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 HSD17B3P37058 310 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 JAK3P52333 1124 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 CEP85LQ5SZL2 805 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 BSNDQ8WZ55 320 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 TRIM51Q9BSJ1 452 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 ERVK-5Q9HDB9 667 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 TOPORSQ9NS56 1045 aaPredicted RBP19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 MAP3K20Q9NYL2 800 aaKnown RBP19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 DENND3A2RUS2 1198 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 PDCLQ13371 301 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 UAP1Q16222 522 aaPredicted RBP19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 PRAMEF18Q5VWM3 479 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 NOP9Q86U38 636 aaKnown RBP19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 SLC47A2Q86VL8 602 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 CCDC26Q8TAB7 109 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 TMEM174Q8WUU8 243 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 ZKSCAN4Q969J2 545 aaPredicted RBP19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 TAOK3Q9H2K8 898 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 SLITRK6Q9H5Y7 841 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 PIM2Q9P1W9 311 aa19.78■□□□□ 0.76
CHRFAM7A-202ENST00000397827 ERLIN2O94905 339 aa19.77■□□□□ 0.76
CHRFAM7A-202ENST00000397827 KRT76Q01546 638 aa19.77■□□□□ 0.76
CHRFAM7A-202ENST00000397827 EPS8L1Q8TE68 723 aa19.77■□□□□ 0.76
CHRFAM7A-202ENST00000397827 FAM84AQ96KN4 292 aa19.77■□□□□ 0.76
CHRFAM7A-202ENST00000397827 GABBR1Q9UBS5 961 aa19.77■□□□□ 0.76
CHRFAM7A-202ENST00000397827 DAAM1Q9Y4D1 1078 aa19.77■□□□□ 0.76
CHRFAM7A-202ENST00000397827 BHMG1C9JSJ3 638 aaPredicted RBP19.77■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CHRNB2P17787 502 aa19.77■□□□□ 0.75
CHRFAM7A-202ENST00000397827 HNRNPH1P31943 449 aaKnown RBP19.77■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SFNP31947 248 aa19.77■□□□□ 0.75
CHRFAM7A-202ENST00000397827 MARCKSL1P49006 195 aa19.77■□□□□ 0.75
CHRFAM7A-202ENST00000397827 DMP1Q13316 513 aaPredicted RBP19.77■□□□□ 0.75
CHRFAM7A-202ENST00000397827 RHOT2Q8IXI1 618 aa19.77■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CEP120Q8N960 986 aa19.77■□□□□ 0.75
CHRFAM7A-202ENST00000397827 KRT35Q92764 455 aa19.77■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CARD9Q9H257 536 aa19.77■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CENPHQ9H3R5 247 aa19.77■□□□□ 0.75
CHRFAM7A-202ENST00000397827 HACL1Q9UJ83 578 aa19.77■□□□□ 0.75
CHRFAM7A-202ENST00000397827 ZNF862O60290 1169 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 NR3C2P08235 984 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 LIG3P49916 1009 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 SMTNP53814 917 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 POU5F1Q01860 360 aaKnown RBP19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 PPARDQ03181 441 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 RPAINQ86UA6 219 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 NLRX1Q86UT6 975 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 CEP170P1Q96L14 293 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 IWS1Q96ST2 819 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 MOV10L1Q9BXT6 1211 aaKnown RBP19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 KMT5AQ9NQR1 393 aa19.76■□□□□ 0.75
CHRFAM7A-202ENST00000397827 TTC7AQ9ULT0 858 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms