RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 CCDC68Q9H2F9 335 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 AGO4Q9HCK5 861 aaKnown RBP16.49■□□□□ 0.23
LSS-202ENST00000397728 STRIP2Q9ULQ0 834 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 MFAP3LO75121 409 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 PSMC1P62191 440 aaKnown RBP16.49■□□□□ 0.23
LSS-202ENST00000397728 MICALCLQ6ZW33 695 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 WNK4Q96J92 1243 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 GPR182O15218 404 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 MOCS3O95396 460 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 MOCS2O96007 188 aaPredicted RBP16.48■□□□□ 0.23
LSS-202ENST00000397728 SLC26A2P50443 739 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 WHAMMP3Q1A5X7 153 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 HDXQ7Z353 690 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 SPATA2LQ8IUW3 424 aaPredicted RBP16.48■□□□□ 0.23
LSS-202ENST00000397728 PCDHA13Q9Y5I0 950 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 LTN1O94822 1766 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 RHOBTB3O94955 611 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 ATF2P15336 505 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 SDC4P31431 198 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 CACNB2Q08289 660 aaPredicted RBP16.48■□□□□ 0.23
LSS-202ENST00000397728 C10orf76Q5T2E6 689 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 SYT2Q8N9I0 419 aaPredicted RBP16.48■□□□□ 0.23
LSS-202ENST00000397728 RUSC1Q9BVN2 902 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 MYPNQ86TC9 1320 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 STAG3L1P0CL83 205 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 INSRRP14616 1297 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 GBP1P32455 592 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 GRIK1P39086 918 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 GUCY2FP51841 1108 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 GLRA4Q5JXX5 417 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 TTC30AQ86WT1 665 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 MKL1Q969V6 931 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 STAP1Q9ULZ2 295 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 CXCR5P32302 372 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 ALDH7A1P49419 539 aaKnown RBP16.48■□□□□ 0.23
LSS-202ENST00000397728 EPHB1P54762 984 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 DPYDQ12882 1025 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 RNF219Q5W0B1 726 aaPredicted RBP16.48■□□□□ 0.23
LSS-202ENST00000397728 DNAAF3Q8N9W5 541 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 SHCBP1Q8NEM2 672 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 TMEM169Q96HH4 297 aa16.48■□□□□ 0.23
LSS-202ENST00000397728 ASTN2O75129 1339 aaPredicted RBP16.47■□□□□ 0.23
LSS-202ENST00000397728 KPNA6O60684 536 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 CD4P01730 458 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 EVX2Q03828 476 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 SEZ6Q53EL9 994 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 RIOX2Q8IUF8 465 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 ADSSL1Q8N142 457 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 KCTD17Q8N5Z5 321 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 MTG1Q9BT17 334 aaPredicted RBP16.47■□□□□ 0.23
LSS-202ENST00000397728 PRRG1O14668 218 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 ENOSF1Q7L5Y1 443 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 SKA2Q8WVK7 121 aaPredicted RBP16.47■□□□□ 0.23
LSS-202ENST00000397728 CSDE1O75534 798 aaKnown RBP16.47■□□□□ 0.23
LSS-202ENST00000397728 CALB1P05937 261 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 ALDH3A1P30838 453 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 PAN2Q504Q3 1202 aaKnown RBP16.47■□□□□ 0.23
LSS-202ENST00000397728 DARS2Q6PI48 645 aaKnown RBP16.47■□□□□ 0.23
LSS-202ENST00000397728 LRRC31Q6UY01 552 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 RHOT2Q8IXI1 618 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 OSMRQ99650 979 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 TINF2Q9BSI4 451 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 C2CD2LO14523 706 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 CYTH3O43739 400 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 SAT1P21673 171 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 MICALL1Q8N3F8 863 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 ANKS1AQ92625 1134 aa16.47■□□□□ 0.23
LSS-202ENST00000397728 RSPH10B2B2RC85 870 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 TEX33O43247 280 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 SH3BP5O60239 455 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 FKTNO75072 461 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 RSPH10BP0C881 870 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 BEX3Q00994 111 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 ELF2Q15723 593 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 BTBD8Q5XKL5 378 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 KRT222Q8N1A0 295 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 SH3TC2Q8TF17 1288 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 C17orf75Q9HAS0 396 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
LSS-202ENST00000397728 PYCARDQ9ULZ3 195 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 PASKQ96RG2 1323 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 PFDN6O15212 129 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 RECQLP46063 649 aaPredicted RBP16.46■□□□□ 0.23
LSS-202ENST00000397728 LMNB2Q03252 620 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 FSCN1Q16658 493 aaKnown RBP16.46■□□□□ 0.23
LSS-202ENST00000397728 PRAMEF19Q5SWL8 479 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 FAM102AQ5T9C2 384 aaPredicted RBP16.46■□□□□ 0.23
LSS-202ENST00000397728 PANX2Q96RD6 677 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 PDE11AQ9HCR9 933 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 PCSK1NQ9UHG2 260 aa16.46■□□□□ 0.23
LSS-202ENST00000397728 SYNGAP1Q96PV0 1343 aa16.46■□□□□ 0.22
LSS-202ENST00000397728 GTF2F1P35269 517 aaKnown RBP eCLIP16.45■□□□□ 0.221e-7■■■□□ 15.6
LSS-202ENST00000397728 SEPT8Q92599 483 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 KRT17Q04695 432 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 GRB10Q13322 594 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 CPLX4Q7Z7G2 160 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 CCDC110Q8TBZ0 833 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 ATP8B4Q8TF62 1192 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 SIK2Q9H0K1 926 aa16.45■□□□□ 0.22
LSS-202ENST00000397728 LMCD1Q9NZU5 365 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms