RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 EPB41L2O43491 1005 aaKnown RBP18.01■□□□□ 0.47
CUX2-202ENST00000397643 MYBP10242 640 aa18.01■□□□□ 0.47
CUX2-202ENST00000397643 GLUD2P49448 558 aa18.01■□□□□ 0.47
CUX2-202ENST00000397643 NLRP5P59047 1200 aa18.01■□□□□ 0.47
CUX2-202ENST00000397643 MOXD1Q6UVY6 613 aa18.01■□□□□ 0.47
CUX2-202ENST00000397643 SRGAP1Q7Z6B7 1085 aa18.01■□□□□ 0.47
CUX2-202ENST00000397643 GPR152Q8TDT2 470 aa18.01■□□□□ 0.47
CUX2-202ENST00000397643 PRPF31Q8WWY3 499 aaKnown RBP18.01■□□□□ 0.47
CUX2-202ENST00000397643 SMG7Q92540 1137 aaKnown RBP18.01■□□□□ 0.47
CUX2-202ENST00000397643 STAMQ92783 540 aa18.01■□□□□ 0.47
CUX2-202ENST00000397643 JAKMIP1Q96N16 626 aaKnown RBP18.01■□□□□ 0.47
CUX2-202ENST00000397643 FAM193BQ96PV7 902 aaPredicted RBP18.01■□□□□ 0.47
CUX2-202ENST00000397643 JPH2Q9BR39 696 aaPredicted RBP18.01■□□□□ 0.47
CUX2-202ENST00000397643 NCOA5Q9HCD5 579 aaKnown RBP18.01■□□□□ 0.47
CUX2-202ENST00000397643 VAV3Q9UKW4 847 aa18.01■□□□□ 0.47
CUX2-202ENST00000397643 PCDHA4Q9UN74 947 aa18.01■□□□□ 0.47
CUX2-202ENST00000397643 ANHXE9PGG2 379 aa18■□□□□ 0.47
CUX2-202ENST00000397643 SLC37A4O43826 429 aa18■□□□□ 0.47
CUX2-202ENST00000397643 EVCP57679 992 aa18■□□□□ 0.47
CUX2-202ENST00000397643 DSG1Q02413 1049 aa18■□□□□ 0.47
CUX2-202ENST00000397643 LAMTOR4Q0VGL1 99 aa18■□□□□ 0.47
CUX2-202ENST00000397643 NONOQ15233 471 aaKnown RBP eCLIP18■□□□□ 0.47
CUX2-202ENST00000397643 PHLDB3Q6NSJ2 640 aa18■□□□□ 0.47
CUX2-202ENST00000397643 KCNG4Q8TDN1 519 aa18■□□□□ 0.47
CUX2-202ENST00000397643 PSPC1Q8WXF1 523 aaKnown RBP18■□□□□ 0.47
CUX2-202ENST00000397643 SLC7A3Q8WY07 619 aa18■□□□□ 0.47
CUX2-202ENST00000397643 NXPE3Q969Y0 559 aa18■□□□□ 0.47
CUX2-202ENST00000397643 TMEM143Q96AN5 459 aa18■□□□□ 0.47
CUX2-202ENST00000397643 EIF2AQ9BY44 585 aaKnown RBP18■□□□□ 0.47
CUX2-202ENST00000397643 C22orf23Q9BZE7 217 aa18■□□□□ 0.47
CUX2-202ENST00000397643 RNF39Q9H2S5 420 aa18■□□□□ 0.47
CUX2-202ENST00000397643 ARHGEF3Q9NR81 526 aa18■□□□□ 0.47
CUX2-202ENST00000397643 CHST7Q9NS84 486 aa18■□□□□ 0.47
CUX2-202ENST00000397643 MIOSQ9NXC5 875 aa18■□□□□ 0.47
CUX2-202ENST00000397643 SSX2IPQ9Y2D8 614 aa18■□□□□ 0.47
CUX2-202ENST00000397643 IPPQ9Y573 584 aa18■□□□□ 0.47
CUX2-202ENST00000397643 MTCL1Q9Y4B5 1905 aaKnown RBP18■□□□□ 0.47
CUX2-202ENST00000397643 DCNP07585 359 aaKnown RBP17.99■□□□□ 0.47
CUX2-202ENST00000397643 SPATA31D3P0C874 917 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 SRGAP2CP0DJJ0 459 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 GLULP15104 373 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 RPS6KB1P23443 525 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 PDIA3P30101 505 aaKnown RBP17.99■□□□□ 0.47
CUX2-202ENST00000397643 MLH1P40692 756 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 OR1G1P47890 313 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 QARSP47897 775 aaKnown RBP17.99■□□□□ 0.47
CUX2-202ENST00000397643 CCT2P78371 535 aaKnown RBP17.99■□□□□ 0.47
CUX2-202ENST00000397643 PPP2R5CQ13362 524 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 HTR4Q13639 388 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 BLOC1S2Q6QNY1 142 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 SPATA31D4Q6ZUB0 917 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 DAGLBQ8NCG7 672 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 HDAC7Q8WUI4 952 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 GAD1Q99259 594 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 NT5C3AQ9H0P0 336 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 SNX14Q9Y5W7 946 aa17.99■□□□□ 0.47
CUX2-202ENST00000397643 EPG5Q9HCE0 2579 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 ARID2Q68CP9 1835 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 DOCK6Q96HP0 2047 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 ARL5CA6NH57 179 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 STK25O00506 426 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 C1RP00736 705 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 SP9P0CG40 484 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 LAMP2P13473 410 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 HSPA4P34932 840 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 SCNN1GP51170 649 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 SPECC1Q5M775 1068 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 LILRA6Q6PI73 481 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 KIAA2013Q8IYS2 634 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 BLIDQ8IZY5 108 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 CNNM3Q8NE01 707 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 CEP170P1Q96L14 293 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 B3GALT6Q96L58 329 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 ZFP42Q96MM3 310 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 KCNMB3Q9NPA1 279 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 UBN1Q9NPG3 1134 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 SLC2A4RGQ9NR83 387 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 BMP2KQ9NSY1 1161 aaPredicted RBP17.98■□□□□ 0.47
CUX2-202ENST00000397643 DDX25Q9UHL0 483 aaKnown RBP17.98■□□□□ 0.47
CUX2-202ENST00000397643 DPP7Q9UHL4 492 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 HES2Q9Y543 173 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 PPME1Q9Y570 386 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 COL4A3Q01955 1670 aa17.98■□□□□ 0.47
CUX2-202ENST00000397643 TDRD15B5MCY1 1934 aaKnown RBP17.98■□□□□ 0.47
CUX2-202ENST00000397643 POTEMA6NI47 508 aa17.97■□□□□ 0.47
CUX2-202ENST00000397643 TGM5O43548 720 aa17.97■□□□□ 0.47
CUX2-202ENST00000397643 TSPAN1O60635 241 aa17.97■□□□□ 0.47
CUX2-202ENST00000397643 ITGA4P13612 1032 aa17.97■□□□□ 0.47
CUX2-202ENST00000397643 RFX1P22670 979 aa17.97■□□□□ 0.47
CUX2-202ENST00000397643 RFC5P40937 340 aa17.97■□□□□ 0.47
CUX2-202ENST00000397643 ELMSAN1Q6PJG2 1045 aa17.97■□□□□ 0.47
CUX2-202ENST00000397643 GET4Q7L5D6 327 aaPredicted RBP17.97■□□□□ 0.47
CUX2-202ENST00000397643 FERMT3Q86UX7 667 aa17.97■□□□□ 0.47
CUX2-202ENST00000397643 MAML2Q8IZL2 1156 aaPredicted RBP17.97■□□□□ 0.47
CUX2-202ENST00000397643 RNF149Q8NC42 400 aa17.97■□□□□ 0.47
CUX2-202ENST00000397643 GSTCDQ8NEC7 633 aa17.97■□□□□ 0.47
CUX2-202ENST00000397643 BACH2Q9BYV9 841 aa17.97■□□□□ 0.47
CUX2-202ENST00000397643 GPR62Q9BZJ7 368 aa17.97■□□□□ 0.47
CUX2-202ENST00000397643 PRKD2Q9BZL6 878 aa17.97■□□□□ 0.47
CUX2-202ENST00000397643 PLEKHA4Q9H4M7 779 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms