RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 C17orf80Q9BSJ5 609 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 LRRC27Q9C0I9 530 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 PRDM12Q9H4Q4 367 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 HPSEQ9Y251 543 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 IPPQ9Y573 584 aa23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 MRPL42Q9Y6G3 142 aaKnown RBP23.31■■□□□ 1.32
TSPAN4-206ENST00000397408 ERVK-21P61565 698 aa23.3■■□□□ 1.32
TSPAN4-206ENST00000397408 STRN3Q13033 797 aa23.3■■□□□ 1.32
TSPAN4-206ENST00000397408 ATF7IP2Q5U623 682 aa23.3■■□□□ 1.32
TSPAN4-206ENST00000397408 EEF1DP3Q658K8 133 aa23.3■■□□□ 1.32
TSPAN4-206ENST00000397408 HAUS6Q7Z4H7 955 aa23.3■■□□□ 1.32
TSPAN4-206ENST00000397408 MRPL10Q7Z7H8 261 aaKnown RBP23.3■■□□□ 1.32
TSPAN4-206ENST00000397408 SMG8Q8ND04 991 aaKnown RBP23.3■■□□□ 1.32
TSPAN4-206ENST00000397408 CNNM3Q8NE01 707 aa23.3■■□□□ 1.32
TSPAN4-206ENST00000397408 MRPS27Q92552 414 aaKnown RBP23.3■■□□□ 1.32
TSPAN4-206ENST00000397408 FIZ1Q96SL8 496 aa23.3■■□□□ 1.32
TSPAN4-206ENST00000397408 MRPL4Q9BYD3 311 aaKnown RBP23.3■■□□□ 1.32
TSPAN4-206ENST00000397408 NXF3Q9H4D5 531 aaKnown RBP23.3■■□□□ 1.32
TSPAN4-206ENST00000397408 HES2Q9Y543 173 aa23.3■■□□□ 1.32
TSPAN4-206ENST00000397408 EPOPA6NHQ4 379 aa23.29■■□□□ 1.32
TSPAN4-206ENST00000397408 LINC00271P0C7V0 271 aa23.29■■□□□ 1.32
TSPAN4-206ENST00000397408 NDUFA8P51970 172 aa23.29■■□□□ 1.32
TSPAN4-206ENST00000397408 AMPD3Q01432 767 aa23.29■■□□□ 1.32
TSPAN4-206ENST00000397408 CEP57L1Q8IYX8 460 aa23.29■■□□□ 1.32
TSPAN4-206ENST00000397408 CASD1Q96PB1 797 aa23.29■■□□□ 1.32
TSPAN4-206ENST00000397408 ADPGKQ9BRR6 497 aa23.29■■□□□ 1.32
TSPAN4-206ENST00000397408 TARS2Q9BW92 718 aaKnown RBP23.29■■□□□ 1.32
TSPAN4-206ENST00000397408 APOL6Q9BWW8 343 aa23.29■■□□□ 1.32
TSPAN4-206ENST00000397408 TRIM9Q9C026 710 aa23.29■■□□□ 1.32
TSPAN4-206ENST00000397408 GOLPH3LQ9H4A5 285 aa23.29■■□□□ 1.32
TSPAN4-206ENST00000397408 SERTAD1Q9UHV2 236 aa23.29■■□□□ 1.32
TSPAN4-206ENST00000397408 NLRC5Q86WI3 1866 aa23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 FAM237AA0A1B0GTK4 181 aa23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 ACTN4O43707 911 aaKnown RBP23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 ITGA4P13612 1032 aa23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 GAP43P17677 238 aa23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 NMT1P30419 496 aaKnown RBP23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 CTNNB1P35222 781 aa23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 SYKP43405 635 aa23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 GLB1LQ6UWU2 654 aa23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 AGMOQ6ZNB7 445 aa23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 CLP1Q92989 425 aaKnown RBP23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 CDX2Q99626 313 aaPredicted RBP23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 RSAD1Q9HA92 442 aa23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 HCSTQ9UBK5 93 aa23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 SEL1LQ9UBV2 794 aa23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 TNFSF13BQ9Y275 285 aa23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 INPP5FQ9Y2H2 1132 aa23.28■■□□□ 1.32
TSPAN4-206ENST00000397408 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 FRMD3A2A2Y4 597 aa23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 GOLGA6L4A6NEF3 574 aa23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 SLFN14P0C7P3 912 aa23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 AFMP43652 599 aa23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 ASIC1P78348 528 aa23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 RALGAPA2Q2PPJ7 1873 aa23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 TMEM192Q8IY95 271 aa23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 HACE1Q8IYU2 909 aa23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 LRRC43Q8N309 656 aa23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 MYLIPQ8WY64 445 aa23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 KCNN1Q92952 543 aa23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 SAMD11Q96NU1 681 aa23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 IPO9Q96P70 1041 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 ACO2Q99798 780 aaKnown RBP23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 KIAA1671Q9BY89 1806 aa23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 PANK4Q9NVE7 773 aa23.27■■□□□ 1.32
TSPAN4-206ENST00000397408 RFXAPO00287 272 aa23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 SCP2P22307 547 aa23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 DCAF4L1Q3SXM0 396 aa23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 EPC2Q52LR7 807 aa23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 HERC4Q5GLZ8 1057 aaPredicted RBP23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 SPOUT1Q5T280 376 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 CCDC65Q8IXS2 484 aa23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 GRAMD1CQ8IYS0 662 aa23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 FBXO22Q8NEZ5 403 aa23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 GDPD5Q8WTR4 605 aa23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 C7orf25Q9BPX7 421 aa23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 MRPL9Q9BYD2 267 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 RNF39Q9H2S5 420 aa23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 TYW1Q9NV66 732 aaKnown RBP23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 TBC1D7Q9P0N9 293 aa23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 USP25Q9UHP3 1055 aa23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 TBX20Q9UMR3 447 aa23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 RWDD3Q9Y3V2 267 aa23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 COL4A4P53420 1690 aaPredicted RBP23.26■■□□□ 1.31
TSPAN4-206ENST00000397408 OFD1O75665 1012 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 CASP1P29466 404 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 COASYQ13057 564 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 ZNF568Q3ZCX4 644 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 CNNM4Q6P4Q7 775 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 SLC17A8Q8NDX2 589 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 RSPH1Q8WYR4 309 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 BICD1Q96G01 975 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 BLZF1Q9H2G9 400 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 MRPL44Q9H9J2 332 aaKnown RBP23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 AKAP5P24588 427 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 BMPR1AP36894 532 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 CSPP1Q1MSJ5 1256 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 ZC2HC1CQ53FD0 456 aaPredicted RBP23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 NOMO2Q5JPE7 1267 aa23.25■■□□□ 1.31
TSPAN4-206ENST00000397408 LRRC55Q6ZSA7 311 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms