RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 KCTD10Q9H3F6 313 aa25.86■■□□□ 1.73
TSPAN4-203ENST00000397397 CTNND2Q9UQB3 1225 aa25.86■■□□□ 1.73
TSPAN4-203ENST00000397397 COLQQ9Y215 455 aaPredicted RBP25.86■■□□□ 1.73
TSPAN4-203ENST00000397397 N4BP3O15049 544 aa25.85■■□□□ 1.73
TSPAN4-203ENST00000397397 SLC39A4Q6P5W5 647 aa25.85■■□□□ 1.73
TSPAN4-203ENST00000397397 CHRDL2Q6WN34 429 aa25.85■■□□□ 1.73
TSPAN4-203ENST00000397397 CDR2LQ86X02 465 aaPredicted RBP25.85■■□□□ 1.73
TSPAN4-203ENST00000397397 NELFBQ8WX92 580 aa25.85■■□□□ 1.73
TSPAN4-203ENST00000397397 FUCA2Q9BTY2 467 aa25.85■■□□□ 1.73
TSPAN4-203ENST00000397397 TMX1Q9H3N1 280 aa25.85■■□□□ 1.73
TSPAN4-203ENST00000397397 SEMA6BQ9H3T3 888 aa25.85■■□□□ 1.73
TSPAN4-203ENST00000397397 CHST12Q9NRB3 414 aa25.85■■□□□ 1.73
TSPAN4-203ENST00000397397 TYW1Q9NV66 732 aaKnown RBP25.85■■□□□ 1.73
TSPAN4-203ENST00000397397 TNFSF13BQ9Y275 285 aa25.85■■□□□ 1.73
TSPAN4-203ENST00000397397 A0A1B0GUA9 196 aa25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 TISP43B9A030 160 aa25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 TGFB1I1O43294 461 aa25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 ZSCAN20P17040 1043 aaPredicted RBP25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 MATR3P43243 847 aaKnown RBP eCLIP25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 EEF1DP3Q658K8 133 aa25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 HS2ST1Q7LGA3 356 aa25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 RPUSD2Q8IZ73 545 aaKnown RBP25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 APBB2Q92870 758 aa25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 P2RX5Q93086 422 aa25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 ZBTB45Q96K62 511 aaPredicted RBP25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 TCHPQ9BT92 498 aa25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 PDZD7Q9H5P4 517 aa25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 ANKFY1Q9P2R3 1169 aa25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 TET1Q8NFU7 2136 aa25.84■■□□□ 1.73
TSPAN4-203ENST00000397397 PDXKO00764 312 aa25.83■■□□□ 1.73
TSPAN4-203ENST00000397397 TOM1L1O75674 476 aa25.83■■□□□ 1.73
TSPAN4-203ENST00000397397 CCNE1P24864 410 aa25.83■■□□□ 1.73
TSPAN4-203ENST00000397397 FPGSQ05932 587 aa25.83■■□□□ 1.73
TSPAN4-203ENST00000397397 PAK1Q13153 545 aa25.83■■□□□ 1.73
TSPAN4-203ENST00000397397 CALUO43852 315 aaPredicted RBP25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 MGEA5O60502 916 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 PPIGQ13427 754 aaKnown RBP eCLIP25.82■■□□□ 1.723e-9■■■□□ 16.8
TSPAN4-203ENST00000397397 DSC3Q14574 896 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 TWF2Q6IBS0 349 aaKnown RBP25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 CENPPQ6IPU0 288 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 CNKSR3Q6P9H4 555 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 MPZL3Q6UWV2 235 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 C11orf57Q6ZUT1 292 aaPredicted RBP25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 ZBTB33Q86T24 672 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 GOLGA5Q8TBA6 731 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 VWCEQ96DN2 955 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 CCDC51Q96ER9 411 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 TSG101Q99816 390 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 LBHD1Q9BQE6 289 aaPredicted RBP25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 FTHL17Q9BXU8 183 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 DNAJC25Q9H1X3 360 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 PTPRHQ9HD43 1115 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 IL23AQ9NPF7 189 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 AGPAT3Q9NRZ7 376 aa25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 CGNQ9P2M7 1197 aaKnown RBP25.82■■□□□ 1.72
TSPAN4-203ENST00000397397 CLIC2O15247 247 aa25.81■■□□□ 1.72
TSPAN4-203ENST00000397397 CLDN3O15551 220 aa25.81■■□□□ 1.72
TSPAN4-203ENST00000397397 PROZP22891 400 aa25.81■■□□□ 1.72
TSPAN4-203ENST00000397397 STX17P56962 302 aa25.81■■□□□ 1.72
TSPAN4-203ENST00000397397 SNRPFP62306 86 aaKnown RBP25.81■■□□□ 1.72
TSPAN4-203ENST00000397397 TCTN1Q2MV58 587 aa25.81■■□□□ 1.72
TSPAN4-203ENST00000397397 ZNF568Q3ZCX4 644 aa25.81■■□□□ 1.72
TSPAN4-203ENST00000397397 ANO6Q4KMQ2 910 aa25.81■■□□□ 1.72
TSPAN4-203ENST00000397397 SLFN12LQ6IEE8 588 aa25.81■■□□□ 1.72
TSPAN4-203ENST00000397397 SLC27A1Q6PCB7 646 aa25.81■■□□□ 1.72
TSPAN4-203ENST00000397397 POMGNT1Q8WZA1 660 aa25.81■■□□□ 1.72
TSPAN4-203ENST00000397397 ADAM2Q99965 735 aa25.81■■□□□ 1.72
TSPAN4-203ENST00000397397 ADPGKQ9BRR6 497 aa25.81■■□□□ 1.72
TSPAN4-203ENST00000397397 TRIM49BA6NDI0 452 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 NPTXRO95502 500 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 PFKMP08237 780 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 ACRP10323 421 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 HARSP12081 509 aaKnown RBP25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 PMS1P54277 932 aaKnown RBP25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 CT47A1Q5JQC4 288 aaPredicted RBP25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 ANKRD40Q6AI12 368 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 ARMCX5Q6P1M9 558 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 APBB1IPQ7Z5R6 666 aaPredicted RBP25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 PRO3102Q9H379 93 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 RWDD2AQ9UIY3 292 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 TRAF3IP3Q9Y228 551 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 STYXL1Q9Y6J8 313 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 CEP290O15078 2479 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 BICDL2A1A5D9 508 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 ABLIM1O14639 778 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 GARTP22102 1010 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 ADSSP30520 456 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 NOLC1Q14978 699 aaKnown RBP eCLIP25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 DCAF4L1Q3SXM0 396 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 ZCWPW2Q504Y3 356 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 UBXN11Q5T124 520 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 LRSAM1Q6UWE0 723 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 FAM43BQ6ZT52 329 aaPredicted RBP25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 CBWD1Q9BRT8 395 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 MSTO1Q9BUK6 570 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 EIF2AQ9BY44 585 aaKnown RBP25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 HAPLN2Q9GZV7 340 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 CDT1Q9H211 546 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 PCIF1Q9H4Z3 704 aa25.8■■□□□ 1.72
TSPAN4-203ENST00000397397 MCF2P10911 925 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms