RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 ZNF510Q9Y2H8 683 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 COL1A1P02452 1464 aaPredicted RBP10.61□□□□□ -0.71
APTX-207ENST00000397172 PASKQ96RG2 1323 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 ZNF646O15015 1829 aaPredicted RBP10.61□□□□□ -0.71
APTX-207ENST00000397172 SMIM31A0A1B0GVY4 71 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 ATP6V1G1O75348 118 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 USP17L8P0C7I0 530 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 KLRC1P26715 233 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 PMS1P54277 932 aaKnown RBP10.61□□□□□ -0.71
APTX-207ENST00000397172 YARSP54577 528 aaKnown RBP10.61□□□□□ -0.71
APTX-207ENST00000397172 ZNF280AP59817 542 aaPredicted RBP10.61□□□□□ -0.71
APTX-207ENST00000397172 RNASE9P60153 205 aaKnown RBP10.61□□□□□ -0.71
APTX-207ENST00000397172 SLC34A1Q06495 639 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 KLHL30Q0D2K2 578 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 AP1B1Q10567 949 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 SCARF1Q14162 830 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 HSP90AA5PQ58FG0 334 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 CCDC80Q76M96 950 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 CATIPQ7Z7H3 387 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 DAAM2Q86T65 1068 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 DDX42Q86XP3 938 aaKnown RBP eCLIP10.61□□□□□ -0.71
APTX-207ENST00000397172 NELFCDQ8IXH7 590 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 CCDC65Q8IXS2 484 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 FITM2Q8N6M3 262 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 FAM13CQ8NE31 585 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 ZNF526Q8TF50 670 aaPredicted RBP10.61□□□□□ -0.71
APTX-207ENST00000397172 C17orf50Q8WW18 174 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 HAUS1Q96CS2 278 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 C7orf25Q9BPX7 421 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 DDX47Q9H0S4 455 aaKnown RBP10.61□□□□□ -0.71
APTX-207ENST00000397172 TMEM60Q9H2L4 133 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 ADAM7Q9H2U9 754 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 GPBP1L1Q9HC44 474 aaPredicted RBP10.61□□□□□ -0.71
APTX-207ENST00000397172 NLRC4Q9NPP4 1024 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 RIC8AQ9NPQ8 531 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 SAR1AQ9NR31 198 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 TCP11L1Q9NUJ3 509 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 AMACRQ9UHK6 382 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 SALL4Q9UJQ4 1053 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 STARD13Q9Y3M8 1113 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 SCN4AP35499 1836 aa10.61□□□□□ -0.71
APTX-207ENST00000397172 POTECB2RU33 542 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 BTBD19C9JJ37 291 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 KLRC4O43908 158 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 AFPP02771 609 aaKnown RBP10.6□□□□□ -0.71
APTX-207ENST00000397172 FAM163BP0C2L3 166 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 PTPN4P29074 926 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 PTENP60484 403 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 MCL1Q07820 350 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 TRADDQ15628 312 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 TNFAIP8L3Q5GJ75 292 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 C6orf163Q5TEZ5 329 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 SEPT14Q6ZU15 432 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 MICALL2Q8IY33 904 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 ZBTB8BQ8NAP8 495 aaPredicted RBP10.6□□□□□ -0.71
APTX-207ENST00000397172 RSPH1Q8WYR4 309 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 LENG1Q96BZ8 264 aaPredicted RBP10.6□□□□□ -0.71
APTX-207ENST00000397172 TGS1Q96RS0 853 aaKnown RBP10.6□□□□□ -0.71
APTX-207ENST00000397172 MTRQ99707 1265 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 MXD3Q9BW11 206 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 TANGO6Q9C0B7 1094 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 NEUROG2Q9H2A3 272 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 DPH5Q9H2P9 285 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 RMI1Q9H9A7 625 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 ADARB2Q9NS39 739 aaKnown RBP10.6□□□□□ -0.71
APTX-207ENST00000397172 NMRK1Q9NWW6 199 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 AMFRQ9UKV5 643 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 JAG2Q9Y219 1238 aa10.6□□□□□ -0.71
APTX-207ENST00000397172 FARP1Q9Y4F1 1045 aaPredicted RBP10.6□□□□□ -0.71
APTX-207ENST00000397172 AKAP11Q9UKA4 1901 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 MYH10P35580 1976 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 A8MXQ7 604 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 BIRC5O15392 142 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 TTI1O43156 1089 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 GGPS1O95749 300 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 LDHBP07195 334 aaKnown RBP10.59□□□□□ -0.71
APTX-207ENST00000397172 RARGP13631 454 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 CPA3P15088 417 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 EPS15P42566 896 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 ZAP70P43403 619 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 TUBP50607 506 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 ASIC1P78348 528 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 SULT2A1Q06520 285 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 NR1H3Q13133 447 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 CNPY1Q3B7I2 92 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 KIAA1755Q5JYT7 1200 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 SNX30Q5VWJ9 437 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 HGSNATQ68CP4 663 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 DUPD1Q68J44 220 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 CENPPQ6IPU0 288 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 USP50Q70EL3 339 aaPredicted RBP10.59□□□□□ -0.71
APTX-207ENST00000397172 KIAA0825Q8IV33 1275 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 ALDH16A1Q8IZ83 802 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 ZNF784Q8NCA9 323 aaPredicted RBP10.59□□□□□ -0.71
APTX-207ENST00000397172 GATA6Q92908 595 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 CCDC77Q9BR77 488 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 AP1M1Q9BXS5 423 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 PITPNM3Q9BZ71 974 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 UBA5Q9GZZ9 404 aa10.59□□□□□ -0.71
APTX-207ENST00000397172 SYNCQ9H7C4 482 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms