RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ADAM17P78536 824 aa14.57□□□□□ -0.08
SEC13-209ENST00000397117 MYL5Q02045 173 aa14.57□□□□□ -0.08
SEC13-209ENST00000397117 PAK1Q13153 545 aa14.57□□□□□ -0.08
SEC13-209ENST00000397117 IQCB1Q15051 598 aa14.57□□□□□ -0.08
SEC13-209ENST00000397117 FAM26DQ5JW98 314 aa14.57□□□□□ -0.08
SEC13-209ENST00000397117 ODR4Q5SWX8 454 aa14.57□□□□□ -0.08
SEC13-209ENST00000397117 EXOC8Q8IYI6 725 aa14.57□□□□□ -0.08
SEC13-209ENST00000397117 KIAA0895Q8NCT3 520 aa14.57□□□□□ -0.08
SEC13-209ENST00000397117 SLC7A3Q8WY07 619 aa14.57□□□□□ -0.08
SEC13-209ENST00000397117 NSUN3Q9H649 340 aaKnown RBP14.57□□□□□ -0.08
SEC13-209ENST00000397117 MRPL44Q9H9J2 332 aaKnown RBP14.57□□□□□ -0.08
SEC13-209ENST00000397117 LARSQ9P2J5 1176 aaKnown RBP14.57□□□□□ -0.08
SEC13-209ENST00000397117 PRKAG3Q9UGI9 489 aa14.57□□□□□ -0.08
SEC13-209ENST00000397117 IKBKBO14920 756 aa14.56□□□□□ -0.08
SEC13-209ENST00000397117 DCXO43602 365 aa14.56□□□□□ -0.08
SEC13-209ENST00000397117 LTBRP36941 435 aa14.56□□□□□ -0.08
SEC13-209ENST00000397117 ZNF131P52739 623 aa14.56□□□□□ -0.08
SEC13-209ENST00000397117 ZP2Q05996 745 aa14.56□□□□□ -0.08
SEC13-209ENST00000397117 EMC2Q15006 297 aa14.56□□□□□ -0.08
SEC13-209ENST00000397117 COBLL1Q53SF7 1204 aa14.56□□□□□ -0.08
SEC13-209ENST00000397117 NELFBQ8WX92 580 aa14.56□□□□□ -0.08
SEC13-209ENST00000397117 KIFAP3Q92845 792 aa14.56□□□□□ -0.08
SEC13-209ENST00000397117 DHTKD1Q96HY7 919 aaPredicted RBP14.56□□□□□ -0.08
SEC13-209ENST00000397117 OLFML3Q9NRN5 406 aa14.56□□□□□ -0.08
SEC13-209ENST00000397117 SETD4Q9NVD3 440 aa14.56□□□□□ -0.08
SEC13-209ENST00000397117 RWDD2AQ9UIY3 292 aa14.56□□□□□ -0.08
SEC13-209ENST00000397117 CTSHP09668 335 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 LINC00271P0C7V0 271 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 PLS3P13797 630 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 STX17P56962 302 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 TBC1D8BQ0IIM8 1120 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 TPD52L1Q16890 204 aaPredicted RBP14.55□□□□□ -0.08
SEC13-209ENST00000397117 CTC1Q2NKJ3 1217 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 STXBP4Q6ZWJ1 553 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 GUF1Q8N442 669 aaKnown RBP14.55□□□□□ -0.08
SEC13-209ENST00000397117 ENOX1Q8TC92 643 aaKnown RBP14.55□□□□□ -0.08
SEC13-209ENST00000397117 ANP32BQ92688 251 aaKnown RBP14.55□□□□□ -0.08
SEC13-209ENST00000397117 APBB2Q92870 758 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 FAM50BQ9Y247 325 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 PCDHA2Q9Y5H9 948 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 TTC3P53804 2025 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 WDR81Q562E7 1941 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 BICDL2A1A5D9 508 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 C5orf67F2Z3F1 127 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 NCK2O43639 380 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 GCNT3O95395 438 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 RB1P06400 928 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 GNAT1P11488 350 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 MAPK7Q13164 816 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 TARBP2Q15633 366 aaKnown RBP14.55□□□□□ -0.08
SEC13-209ENST00000397117 ZNF484Q5JVG2 852 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 ADHFE1Q8IWW8 467 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 DAW1Q8N136 415 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 JPH2Q9BR39 696 aaPredicted RBP14.55□□□□□ -0.08
SEC13-209ENST00000397117 IFIH1Q9BYX4 1025 aaKnown RBP14.55□□□□□ -0.08
SEC13-209ENST00000397117 DHX33Q9H6R0 707 aaKnown RBP14.55□□□□□ -0.08
SEC13-209ENST00000397117 GPRC5CQ9NQ84 441 aa14.55□□□□□ -0.08
SEC13-209ENST00000397117 SMTNP53814 917 aa14.54□□□□□ -0.08
SEC13-209ENST00000397117 PLCB2Q00722 1185 aa14.54□□□□□ -0.08
SEC13-209ENST00000397117 DMP1Q13316 513 aaPredicted RBP14.54□□□□□ -0.08
SEC13-209ENST00000397117 FIBCD1Q8N539 461 aa14.54□□□□□ -0.08
SEC13-209ENST00000397117 P2RX5Q93086 422 aa14.54□□□□□ -0.08
SEC13-209ENST00000397117 IFT74Q96LB3 600 aa14.54□□□□□ -0.08
SEC13-209ENST00000397117 POLR3FQ9H1D9 316 aaPredicted RBP14.54□□□□□ -0.08
SEC13-209ENST00000397117 KCNH6Q9H252 994 aa14.54□□□□□ -0.08
SEC13-209ENST00000397117 C17orf75Q9HAS0 396 aa14.54□□□□□ -0.08
SEC13-209ENST00000397117 CLDND1Q9NY35 253 aa14.54□□□□□ -0.08
SEC13-209ENST00000397117 KCNG1Q9UIX4 513 aa14.54□□□□□ -0.08
SEC13-209ENST00000397117 GAS2O43903 313 aaKnown RBP14.53□□□□□ -0.08
SEC13-209ENST00000397117 MAFO75444 373 aaPredicted RBP14.53□□□□□ -0.08
SEC13-209ENST00000397117 CHRNA1P02708 482 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 MAPTP10636 758 aaKnown RBP14.53□□□□□ -0.08
SEC13-209ENST00000397117 INSRRP14616 1297 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 CCNE1P24864 410 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 BMPR1AP36894 532 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 PEX3P56589 373 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 IGBP1P78318 339 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 SPATA1Q5VX52 437 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 EP400NLQ6ZTU2 488 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 RPAINQ86UA6 219 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 GLIS3Q8NEA6 775 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 CEP89Q96ST8 783 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 TSG101Q99816 390 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 LMAN2LQ9H0V9 348 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 XPNPEP1Q9NQW7 623 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 NFE2L3Q9Y4A8 694 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 PCDHB13Q9Y5F0 798 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 TECTAO75443 2155 aa14.53□□□□□ -0.08
SEC13-209ENST00000397117 CCDC169A6NNP5 214 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 ZBTB42B2RXF5 422 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 K7ENM7 598 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 GRM6O15303 877 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 EIF3DO15371 548 aaKnown RBP eCLIP14.52□□□□□ -0.08
SEC13-209ENST00000397117 MYBP10242 640 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 NMT1P30419 496 aaKnown RBP14.52□□□□□ -0.08
SEC13-209ENST00000397117 CTNNB1P35222 781 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 IRS1P35568 1242 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 NHLH1Q02575 133 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 HYAL1Q12794 435 aa14.52□□□□□ -0.08
SEC13-209ENST00000397117 PPFIA1Q13136 1202 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms