RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 CEP57L1Q8IYX8 460 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 SUGCTQ9HAC7 445 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 C1orf112Q9NSG2 853 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 CGNQ9P2M7 1197 aaKnown RBP11.66□□□□□ -0.54
NUP98-205ENST00000397007 AKT3Q9Y243 479 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 SCN1AP35498 2009 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 H0YCG3 227 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 C1orf220Q5T0J3 134 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 EEF1DP3Q658K8 133 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 PSRC1Q6PGN9 363 aaPredicted RBP11.66□□□□□ -0.54
NUP98-205ENST00000397007 METTL13Q8N6R0 699 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 EIF2AQ9BY44 585 aaKnown RBP11.66□□□□□ -0.54
NUP98-205ENST00000397007 CPSF3Q9UKF6 684 aaKnown RBP11.66□□□□□ -0.54
NUP98-205ENST00000397007 EFCAB14O75071 495 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 PAPLNO95428 1278 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 PMS1P54277 932 aaKnown RBP11.66□□□□□ -0.54
NUP98-205ENST00000397007 CCL23P55773 120 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 CLLU1OSQ5K130 101 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.66□□□□□ -0.54
NUP98-205ENST00000397007 AGMOQ6ZNB7 445 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 LIMS2Q7Z4I7 341 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 ECHDC2Q86YB7 292 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 CASD1Q96PB1 797 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 DUSP9Q99956 384 aaKnown RBP11.66□□□□□ -0.54
NUP98-205ENST00000397007 INO80BQ9C086 356 aaPredicted RBP11.66□□□□□ -0.54
NUP98-205ENST00000397007 CDT1Q9H211 546 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 KMT5AQ9NQR1 393 aa11.66□□□□□ -0.54
NUP98-205ENST00000397007 EOMESO95936 686 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 PRKCBP05771 671 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 GHRP10912 638 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 GARTP22102 1010 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 SFPQP23246 707 aaKnown RBP eCLIP11.65□□□□□ -0.54
NUP98-205ENST00000397007 GRM5P41594 1212 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 ODR4Q5SWX8 454 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 TTI2Q6NXR4 508 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 CCDC65Q8IXS2 484 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 ZSWIM2Q8NEG5 633 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 PPP1R12CQ9BZL4 782 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 CNTN3Q9P232 1028 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 XIRP2A4UGR9 3374 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 DENND3A2RUS2 1198 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 MCF2P10911 925 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 LRIT3Q3SXY7 679 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 FAM26FQ5R3K3 315 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 CLP1Q92989 425 aaKnown RBP11.65□□□□□ -0.54
NUP98-205ENST00000397007 BPIFA3Q9BQP9 254 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 GTPBP4Q9BZE4 634 aaKnown RBP11.65□□□□□ -0.54
NUP98-205ENST00000397007 BMP2KQ9NSY1 1161 aaPredicted RBP11.65□□□□□ -0.54
NUP98-205ENST00000397007 GDAQ9Y2T3 454 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 B4GALT3O60512 393 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 TOM1L1O75674 476 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 NPTXRO95502 500 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 CTSHP09668 335 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 FGFR4P22455 802 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 AFMP43652 599 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 DSC1Q08554 894 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 DPY19L2P1Q6NXN4 242 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 SLC27A1Q6PCB7 646 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 ZNF365Q70YC5 407 aa11.65□□□□□ -0.54
NUP98-205ENST00000397007 RPUSD2Q8IZ73 545 aaKnown RBP11.65□□□□□ -0.54
NUP98-205ENST00000397007 TISP43B9A030 160 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 PDXKO00764 312 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 PRCPP42785 496 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 DEFB103AP81534 67 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 MLLT1Q03111 559 aaPredicted RBP11.64□□□□□ -0.55
NUP98-205ENST00000397007 PAK2Q13177 524 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 MPZL3Q6UWV2 235 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 C15orf39Q6ZRI6 1047 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 PLEKHO2Q8TD55 490 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 NLRP4Q96MN2 994 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 CWH43Q9H720 699 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 USP20Q9Y2K6 914 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 KIF26AQ9ULI4 1882 aaPredicted RBP11.64□□□□□ -0.55
NUP98-205ENST00000397007 C5orf67F2Z3F1 127 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 CSDE1O75534 798 aaKnown RBP11.64□□□□□ -0.55
NUP98-205ENST00000397007 RPS6KA5O75582 802 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 KCNE1P15382 129 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 SYN1P17600 705 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 RAD51AP2Q09MP3 1159 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 SHHQ15465 462 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 NFKBIBQ15653 356 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 EDRF1Q3B7T1 1238 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 SLC24A5Q71RS6 500 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 IRF2BP1Q8IU81 584 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 NLRP7Q8WX94 980 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 MFSD14AQ96MC6 490 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 PPP1R10Q96QC0 940 aaKnown RBP11.64□□□□□ -0.55
NUP98-205ENST00000397007 TSPAN18Q96SJ8 248 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 TMEM161AQ9NX61 479 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 DENND4CQ5VZ89 1909 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 MEIS3P2A8K0S8 358 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 PTGESO14684 152 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 ARHGEF15O94989 841 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 SRGAP2CP0DJJ0 459 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 RAG1P15918 1043 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 PTMSP20962 102 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 NCAPHQ15003 741 aa11.64□□□□□ -0.55
NUP98-205ENST00000397007 KNOP1Q1ED39 458 aaKnown RBP11.64□□□□□ -0.55
NUP98-205ENST00000397007 APTXQ7Z2E3 356 aaKnown RBP11.64□□□□□ -0.55
NUP98-205ENST00000397007 NPAS4Q8IUM7 802 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms