RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 CBWD1Q9BRT8 395 aa16.92■□□□□ 0.3
HOXA3-202ENST00000396352 TEKT3Q9BXF9 490 aa16.92■□□□□ 0.3
HOXA3-202ENST00000396352 A1CFQ9NQ94 594 aaKnown RBP16.92■□□□□ 0.3
HOXA3-202ENST00000396352 CNOT7Q9UIV1 285 aaKnown RBP16.92■□□□□ 0.3
HOXA3-202ENST00000396352 IPO5O00410 1097 aaKnown RBP16.92■□□□□ 0.3
HOXA3-202ENST00000396352 PODXLO00592 558 aa16.92■□□□□ 0.3
HOXA3-202ENST00000396352 ATMINO43313 823 aaPredicted RBP16.92■□□□□ 0.3
HOXA3-202ENST00000396352 SGPL1O95470 568 aa16.92■□□□□ 0.3
HOXA3-202ENST00000396352 MMEP08473 750 aa16.92■□□□□ 0.3
HOXA3-202ENST00000396352 PYGMP11217 842 aa16.92■□□□□ 0.3
HOXA3-202ENST00000396352 SCTRP47872 440 aa16.92■□□□□ 0.3
HOXA3-202ENST00000396352 CDR1P51861 262 aa16.92■□□□□ 0.3
HOXA3-202ENST00000396352 SETQ01105 290 aaPredicted RBP16.92■□□□□ 0.3
HOXA3-202ENST00000396352 CYP1B1Q16678 543 aa16.92■□□□□ 0.3
HOXA3-202ENST00000396352 PADI6Q6TGC4 694 aa16.92■□□□□ 0.3
HOXA3-202ENST00000396352 CPNE8Q86YQ8 564 aa16.92■□□□□ 0.3
HOXA3-202ENST00000396352 EPS8L1Q8TE68 723 aa16.92■□□□□ 0.3
HOXA3-202ENST00000396352 ANKRD63C9JTQ0 380 aa16.91■□□□□ 0.3
HOXA3-202ENST00000396352 P4HA2O15460 535 aa16.91■□□□□ 0.3
HOXA3-202ENST00000396352 GGPS1O95749 300 aa16.91■□□□□ 0.3
HOXA3-202ENST00000396352 TRAF1Q13077 416 aa16.91■□□□□ 0.3
HOXA3-202ENST00000396352 MESDQ14696 234 aa16.91■□□□□ 0.3
HOXA3-202ENST00000396352 SIX1Q15475 284 aaPredicted RBP16.91■□□□□ 0.3
HOXA3-202ENST00000396352 NOP9Q86U38 636 aaKnown RBP16.91■□□□□ 0.3
HOXA3-202ENST00000396352 MASTLQ96GX5 879 aa16.91■□□□□ 0.3
HOXA3-202ENST00000396352 CD248Q9HCU0 757 aa16.91■□□□□ 0.3
HOXA3-202ENST00000396352 GBP1P32455 592 aa16.91■□□□□ 0.3
HOXA3-202ENST00000396352 TNFAIP8L3Q5GJ75 292 aa16.91■□□□□ 0.3
HOXA3-202ENST00000396352 MAEAQ7L5Y9 396 aa16.91■□□□□ 0.3
HOXA3-202ENST00000396352 C12orf56Q8IXR9 622 aa16.91■□□□□ 0.3
HOXA3-202ENST00000396352 VTI1AQ96AJ9 217 aa16.91■□□□□ 0.3
HOXA3-202ENST00000396352 TMEM109Q9BVC6 243 aa16.91■□□□□ 0.3
HOXA3-202ENST00000396352 TMX2Q9Y320 296 aa16.91■□□□□ 0.3
HOXA3-202ENST00000396352 EPS8L3Q8TE67 593 aaKnown RBP16.9■□□□□ 0.3
HOXA3-202ENST00000396352 P3H4Q92791 437 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 SELENOSQ9BQE4 189 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 JPH2Q9BR39 696 aaPredicted RBP16.9■□□□□ 0.3
HOXA3-202ENST00000396352 WNT8AQ9H1J5 351 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 KDM4CQ9H3R0 1056 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 TRPC6Q9Y210 931 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 TLDC2A0PJX2 215 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 SMIM23A6NLE4 172 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 FGFR4P22455 802 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 SEL1L2Q5TEA6 688 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 COL23A1Q86Y22 540 aaPredicted RBP16.9■□□□□ 0.3
HOXA3-202ENST00000396352 FAM71AQ8IYT1 594 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 FUKQ8N0W3 1084 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 TMX4Q9H1E5 349 aaPredicted RBP16.9■□□□□ 0.3
HOXA3-202ENST00000396352 TMEM206Q9H813 350 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 ACP6Q9NPH0 428 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 HAUS2Q9NVX0 235 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 PARP2Q9UGN5 583 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 RGS16O15492 202 aaPredicted RBP16.9■□□□□ 0.3
HOXA3-202ENST00000396352 RIPK2O43353 540 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 PDE6BP35913 854 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 ADCY2Q08462 1091 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 CETN1Q12798 172 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 CYB5D1Q6P9G0 228 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 ART4Q93070 314 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 ZKSCAN4Q969J2 545 aaPredicted RBP16.9■□□□□ 0.3
HOXA3-202ENST00000396352 USP20Q9Y2K6 914 aa16.9■□□□□ 0.3
HOXA3-202ENST00000396352 DDX39AO00148 427 aaKnown RBP16.89■□□□□ 0.29
HOXA3-202ENST00000396352 AGTP01019 485 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 ITGB5P18084 799 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 COILP38432 576 aaPredicted RBP16.89■□□□□ 0.29
HOXA3-202ENST00000396352 BTBD6Q96KE9 485 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 KREMEN1Q96MU8 473 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 RIT2Q99578 217 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 MTFR1LQ9H019 292 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 TMEM117Q9H0C3 514 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 EHMT1Q9H9B1 1298 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 ARHGEF10LQ9HCE6 1279 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 HSPBP1Q9NZL4 362 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 MAPTP10636 758 aaKnown RBP16.89■□□□□ 0.29
HOXA3-202ENST00000396352 GHRP10912 638 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 GZMAP12544 262 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 GSCP56915 257 aaPredicted RBP16.89■□□□□ 0.29
HOXA3-202ENST00000396352 C6orf118Q5T5N4 469 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 PIGWQ7Z7B1 504 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 SLC47A2Q86VL8 602 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 SLC13A5Q86YT5 568 aaPredicted RBP16.89■□□□□ 0.29
HOXA3-202ENST00000396352 MORC4Q8TE76 937 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 HVCN1Q96D96 273 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 PRMT6Q96LA8 375 aaPredicted RBP16.89■□□□□ 0.29
HOXA3-202ENST00000396352 MXRA8Q9BRK3 442 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 CCDC134Q9H6E4 229 aa16.89■□□□□ 0.29
HOXA3-202ENST00000396352 MTRF1LQ9UGC7 380 aaKnown RBP16.89■□□□□ 0.29
HOXA3-202ENST00000396352 ASAP2O43150 1006 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 XRCC4Q13426 336 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 ZNF568Q3ZCX4 644 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 CCDC91Q7Z6B0 441 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 XXYLT1Q8NBI6 393 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 UHMK1Q8TAS1 419 aaKnown RBP16.88■□□□□ 0.29
HOXA3-202ENST00000396352 ACCSQ96QU6 501 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.88■□□□□ 0.29
HOXA3-202ENST00000396352 LARSQ9P2J5 1176 aaKnown RBP16.88■□□□□ 0.29
HOXA3-202ENST00000396352 MRPL11Q9Y3B7 192 aaKnown RBP16.88■□□□□ 0.29
HOXA3-202ENST00000396352 CHUKO15111 745 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 CYP1A2P05177 515 aa16.88■□□□□ 0.29
HOXA3-202ENST00000396352 RARAP10276 462 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms