RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 OLFML3Q9NRN5 406 aa15.15■□□□□ 0.02
CCHCR1-203ENST00000396268 PNMA2Q9UL42 364 aa15.15■□□□□ 0.02
CCHCR1-203ENST00000396268 L3MBTL1Q9Y468 752 aa15.15■□□□□ 0.02
CCHCR1-203ENST00000396268 EZRP15311 586 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 YBX3P16989 372 aaKnown RBP eCLIP15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 GAP43P17677 238 aa15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 FAM133BQ5BKY9 247 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 FKBP1CQ5VVH2 108 aa15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 FAM178BQ8IXR5 827 aa15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 GMCL1P1Q8NEA9 526 aa15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 SELENOSQ9BQE4 189 aa15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 SRRM3A6NNA2 597 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 BHMG1C9JSJ3 638 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 DDX3YO15523 660 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 DDNO94850 711 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 SHBGP04278 402 aa15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 PTENP60484 403 aa15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 GKAP1Q5VSY0 366 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 ATP8B4Q8TF62 1192 aa15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 NAP1L3Q99457 506 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 ERP44Q9BS26 406 aa15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 INTS2Q9H0H0 1204 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 CHORDC1Q9UHD1 332 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-203ENST00000396268 CTNND1O60716 968 aaKnown RBP15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 POU5F1Q01860 360 aaKnown RBP15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 SYDE2Q5VT97 1194 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 NAIF1Q69YI7 327 aaPredicted RBP15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 TBC1D1Q86TI0 1168 aaPredicted RBP15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 SYCP3Q8IZU3 236 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 BORCS6Q96GS4 357 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 SGSM3Q96HU1 749 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 POLR3CQ9BUI4 534 aaPredicted RBP15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.13■□□□□ 0.012e-6■■■■■ 137.7
CCHCR1-203ENST00000396268 CTTNBP2NLQ9P2B4 639 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 STK24Q9Y6E0 443 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 PCNTO95613 3336 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 ZMYM2Q9UBW7 1377 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 EXOC3O60645 756 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 CFBP00751 764 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 RPS12P25398 132 aaKnown RBP15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 MYL7Q01449 175 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 PRKG1Q13976 671 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 ODR4Q5SWX8 454 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 LRCH2Q5VUJ6 765 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 SEC14L1Q92503 715 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 ALG3Q92685 438 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 STAMBPL1Q96FJ0 436 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 GMCL1Q96IK5 515 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 SYT17Q9BSW7 474 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 CARD9Q9H257 536 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 GGA2Q9UJY4 613 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 PRR12Q9ULL5 1215 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 TMX2Q9Y320 296 aa15.13■□□□□ 0.01
CCHCR1-203ENST00000396268 IFNAR2P48551 515 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 PPATQ06203 517 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 MYO1EQ12965 1108 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 BYSLQ13895 437 aaKnown RBP15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 MAEAQ7L5Y9 396 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 HOOK3Q86VS8 718 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 FBXO25Q8TCJ0 367 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 HOOK2Q96ED9 719 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 ZNF341Q9BYN7 854 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 APEX2Q9UBZ4 518 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 FOXN3O00409 490 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 CLGNO14967 610 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 PPFIA2O75334 1257 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 SLITRK3O94933 977 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 UPP2O95045 317 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 PEX19P40855 299 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 EIF3BP55884 814 aaKnown RBP15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 DENND2CQ68D51 928 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 CCDC174Q6PII3 467 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 JAMLQ86YT9 394 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 NEK9Q8TD19 979 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 C18orf8Q96DM3 657 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 CCDC113Q9H0I3 377 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 COG5Q9UP83 839 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 ALG6Q9Y672 507 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 NCANO14594 1321 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 EIF3DO15371 548 aaKnown RBP eCLIP15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 PMS2P54278 862 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 C1orf186Q6ZWK4 172 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 OLIG1Q8TAK6 271 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 TACO1Q9BSH4 297 aaKnown RBP15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 ARHGEF10LQ9HCE6 1279 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 AGPAT3Q9NRZ7 376 aa15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 TTC7AQ9ULT0 858 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.12■□□□□ 0.01
CCHCR1-203ENST00000396268 ATAD5Q96QE3 1844 aa15.11■□□□□ 0.01
CCHCR1-203ENST00000396268 POLR2AP24928 1970 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-203ENST00000396268 ANKRD62A6NC57 917 aa15.11■□□□□ 0.01
CCHCR1-203ENST00000396268 TBC1D12O60347 775 aa15.11■□□□□ 0.01
CCHCR1-203ENST00000396268 DUPD1Q68J44 220 aa15.11■□□□□ 0.01
CCHCR1-203ENST00000396268 ZNF746Q6NUN9 644 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-203ENST00000396268 SLC20A1Q8WUM9 679 aa15.11■□□□□ 0.01
CCHCR1-203ENST00000396268 HSD17B14Q9BPX1 270 aa15.11■□□□□ 0.01
CCHCR1-203ENST00000396268 GPR88Q9GZN0 384 aa15.11■□□□□ 0.01
CCHCR1-203ENST00000396268 A1CFQ9NQ94 594 aaKnown RBP15.11■□□□□ 0.01
CCHCR1-203ENST00000396268 RASAL2Q9UJF2 1139 aa15.11■□□□□ 0.01
CCHCR1-203ENST00000396268 KIF1CO43896 1103 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms