RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 CPA3P15088 417 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 TNFRSF8P28908 595 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 TXKP42681 527 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 CCR3P51677 355 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 RESTQ13127 1097 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 HLTFQ14527 1009 aaKnown RBP eCLIP9.52□□□□□ -0.89
MSH5-205ENST00000395853 PLS1Q14651 629 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 NDUFA5Q16718 116 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 ZC2HC1CQ53FD0 456 aaPredicted RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 PAPD7Q5XG87 772 aaKnown RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 KLHL35Q6PF15 583 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 VASH1Q7L8A9 365 aaPredicted RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 LSMEM2Q8N112 164 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 PIGOQ8TEQ8 1089 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 GAB3Q8WWW8 586 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 PMM1Q92871 262 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 FERMT2Q96AC1 680 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 PPP1R10Q96QC0 940 aaKnown RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 ERP44Q9BS26 406 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 NMRK1Q9NWW6 199 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 SAGE1Q9NXZ1 904 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 IL1RAPL1Q9NZN1 696 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 NDUFA13Q9P0J0 144 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 DMGDHQ9UI17 866 aaKnown RBP9.52□□□□□ -0.89
MSH5-205ENST00000395853 USP20Q9Y2K6 914 aa9.52□□□□□ -0.89
MSH5-205ENST00000395853 SRGAP2O75044 1071 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 ATXN8OSP0DMR3 200 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 SERPINB6P35237 376 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 RGS2P41220 211 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 CDK7P50613 346 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 RTP1P59025 263 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 HAND2P61296 217 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 PPP2R2AP63151 447 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 EXOSC10Q01780 885 aaKnown RBP9.51□□□□□ -0.89
MSH5-205ENST00000395853 MYLK3Q32MK0 819 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 SLC10A5Q5PT55 438 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 MMGT1Q8N4V1 131 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 DNAJC1Q96KC8 554 aaKnown RBP9.51□□□□□ -0.89
MSH5-205ENST00000395853 DDX23Q9BUQ8 820 aaKnown RBP9.51□□□□□ -0.89
MSH5-205ENST00000395853 B3GNT4Q9C0J1 378 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 TMBIM4Q9HC24 238 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 PIH1D3Q9NQM4 214 aaKnown RBP9.51□□□□□ -0.89
MSH5-205ENST00000395853 GPHNQ9NQX3 736 aaPredicted RBP9.51□□□□□ -0.89
MSH5-205ENST00000395853 TAF1P21675 1872 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 NTSR2O95665 410 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 VHLP40337 213 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 FMR1Q06787 632 aaKnown RBP eCLIP9.51□□□□□ -0.89
MSH5-205ENST00000395853 C2orf54Q08AI8 447 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 DGKZQ13574 1117 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 TNIP1Q15025 636 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 SYCP2LQ5T4T6 812 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 SIGIRRQ6IA17 410 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 ZCCHC8Q6NZY4 707 aaKnown RBP9.51□□□□□ -0.89
MSH5-205ENST00000395853 MARK2Q7KZI7 788 aaKnown RBP9.51□□□□□ -0.89
MSH5-205ENST00000395853 PIGWQ7Z7B1 504 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 MREGQ8N565 214 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 SLC17A8Q8NDX2 589 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 TNIP2Q8NFZ5 429 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 SH3TC2Q8TF17 1288 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 NELFBQ8WX92 580 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 LPIN2Q92539 896 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 MRPS27Q92552 414 aaKnown RBP9.51□□□□□ -0.89
MSH5-205ENST00000395853 HSPBAP1Q96EW2 488 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 NUDCD1Q96RS6 583 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 PPP1R9AQ9ULJ8 1098 aa9.51□□□□□ -0.89
MSH5-205ENST00000395853 ZNF536O15090 1300 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 PABPN1LA6NDY0 278 aaKnown RBP9.5□□□□□ -0.89
MSH5-205ENST00000395853 KIF28PB7ZC32 967 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 ADAM23O75077 832 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 FGAP02671 866 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 GLULP15104 373 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 FGFR2P21802 821 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 ME1P48163 572 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 OCRLQ01968 901 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 CXCL9Q07325 125 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 COX10Q12887 443 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 BNIP1Q12981 228 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 BIRC3Q13489 604 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 DIXDC1Q155Q3 683 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 C15orf59Q2T9L4 293 aaPredicted RBP9.5□□□□□ -0.89
MSH5-205ENST00000395853 IL23RQ5VWK5 629 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 Q6ZNX1 250 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 ASRGL1Q7L266 308 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 C11orf96Q7Z7L8 435 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 DDHD1Q8NEL9 900 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 VPS50Q96JG6 964 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 LRRC1Q9BTT6 524 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 STOML1Q9UBI4 398 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 MAFFQ9ULX9 164 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 SNX9Q9Y5X1 595 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 IVNS1ABPQ9Y6Y0 642 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 COL4A1P02462 1669 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 MROH7Q68CQ1 1323 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 SIGLEC16A6NMB1 481 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 AP3B1O00203 1094 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 ADCY3O60266 1144 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 SNX2O60749 519 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 KCNJ13O60928 360 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 MTA2O94776 668 aa9.5□□□□□ -0.89
MSH5-205ENST00000395853 MYCP01106 439 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms