RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 B3GNT5Q9BYG0 378 aa7.06□□□□□ -1.28
CDKN3-203ENST00000395577 KMT5AQ9NQR1 393 aa7.06□□□□□ -1.28
CDKN3-203ENST00000395577 FAM53CQ9NYF3 392 aa7.06□□□□□ -1.28
CDKN3-203ENST00000395577 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.06□□□□□ -1.28
CDKN3-203ENST00000395577 NUP160Q12769 1436 aa7.06□□□□□ -1.28
CDKN3-203ENST00000395577 ABCA5Q8WWZ7 1642 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 RPTORQ8N122 1335 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 SEMA7AO75326 666 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 EIF3JO75822 258 aaKnown RBP7.05□□□□□ -1.28
CDKN3-203ENST00000395577 RPLP2P05387 115 aaKnown RBP7.05□□□□□ -1.28
CDKN3-203ENST00000395577 LTA4HP09960 611 aaKnown RBP7.05□□□□□ -1.28
CDKN3-203ENST00000395577 COL6A1P12109 1028 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 HNRNPLP14866 589 aaKnown RBP eCLIP7.05□□□□□ -1.28
CDKN3-203ENST00000395577 CTSSP25774 331 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 ADSLP30566 484 aaPredicted RBP7.05□□□□□ -1.28
CDKN3-203ENST00000395577 STAT5BP51692 787 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 KCNQ1P51787 676 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 MEF2AQ02078 507 aaPredicted RBP7.05□□□□□ -1.28
CDKN3-203ENST00000395577 DSC2Q02487 901 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 MLANAQ16655 118 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 KIAA0753Q2KHM9 967 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 NPNTQ6UXI9 565 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 RHOT1Q8IXI2 618 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 KIAA0319LQ8IZA0 1049 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 NKD2Q969F2 451 aaPredicted RBP7.05□□□□□ -1.28
CDKN3-203ENST00000395577 LRFN3Q9BTN0 628 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 ABCA10Q8WWZ4 1543 aa7.05□□□□□ -1.28
CDKN3-203ENST00000395577 PRAMEF4O60810 478 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 GAAP10253 952 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 FAM193AP78312 1265 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 TOP3AQ13472 1001 aaPredicted RBP7.04□□□□□ -1.28
CDKN3-203ENST00000395577 SEPT2Q15019 361 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 EIF4HQ15056 248 aaKnown RBP7.04□□□□□ -1.28
CDKN3-203ENST00000395577 VPS72Q15906 364 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 CCDC157Q569K6 752 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 DARS2Q6PI48 645 aaKnown RBP7.04□□□□□ -1.28
CDKN3-203ENST00000395577 ABHD15Q6UXT9 468 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 C11orf96Q7Z7L8 435 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 TTC7BQ86TV6 843 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 DRC7Q8IY82 874 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 IFNL2Q8IZJ0 200 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 UNC5BQ8IZJ1 945 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 PIK3C3Q8NEB9 887 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDKN3-203ENST00000395577 RGMAQ96B86 450 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 UIMC1Q96RL1 719 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 STRBPQ96SI9 672 aaKnown RBP7.04□□□□□ -1.28
CDKN3-203ENST00000395577 GCM1Q9NP62 436 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 PCDHB1Q9Y5F3 818 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 PMF1-BGLAPU3KQ54 211 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 SHROOM2Q13796 1616 aa7.04□□□□□ -1.28
CDKN3-203ENST00000395577 DAPK3O43293 454 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 PHF2O75151 1096 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 ENDOD1O94919 500 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 FTLP02792 175 aaPredicted RBP7.03□□□□□ -1.28
CDKN3-203ENST00000395577 POLD1P28340 1107 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 IL13P35225 146 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 IL12RB1P42701 662 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 MAP2K6P52564 334 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 UBE3CQ15386 1083 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 ANO6Q4KMQ2 910 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 GJC2Q5T442 439 aaPredicted RBP7.03□□□□□ -1.28
CDKN3-203ENST00000395577 THEMIS2Q5TEJ8 643 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 DAAM2Q86T65 1068 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 KLHDC4Q8TBB5 520 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 PARD3BQ8TEW8 1205 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 SNX33Q8WV41 574 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 ZCCHC14Q8WYQ9 949 aaKnown RBP7.03□□□□□ -1.28
CDKN3-203ENST00000395577 ELAC2Q9BQ52 826 aaKnown RBP7.03□□□□□ -1.28
CDKN3-203ENST00000395577 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.03□□□□□ -1.28
CDKN3-203ENST00000395577 PHTF1Q9UMS5 762 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 L1RE1Q9UN81 338 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 STXBP5LQ9Y2K9 1186 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 PCDHGB6Q9Y5F9 930 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 NR2E3Q9Y5X4 410 aa7.03□□□□□ -1.28
CDKN3-203ENST00000395577 CAPN8A6NHC0 703 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 LRRC10BA6NIK2 292 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 PQBP1O60828 265 aaKnown RBP7.02□□□□□ -1.29
CDKN3-203ENST00000395577 HMGCRP04035 888 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 PLA2G1BP04054 148 aaKnown RBP7.02□□□□□ -1.29
CDKN3-203ENST00000395577 MYL3P08590 195 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 ECHS1P30084 290 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 AGFG1P52594 562 aaKnown RBP7.02□□□□□ -1.29
CDKN3-203ENST00000395577 CACNB3P54284 484 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 SESN2P58004 480 aaPredicted RBP7.02□□□□□ -1.29
CDKN3-203ENST00000395577 SAFB2Q14151 953 aaKnown RBP eCLIP7.02□□□□□ -1.29
CDKN3-203ENST00000395577 PRR31Q5SQ13 230 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 RNF220Q5VTB9 566 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 TAS1R1Q7RTX1 841 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 NBPF11Q86T75 865 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 RTKN2Q8IZC4 609 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 FBXO15Q8NCQ5 510 aaPredicted RBP7.02□□□□□ -1.29
CDKN3-203ENST00000395577 NSUN6Q8TEA1 469 aaKnown RBP7.02□□□□□ -1.29
CDKN3-203ENST00000395577 HOXB13Q92826 284 aaPredicted RBP7.02□□□□□ -1.29
CDKN3-203ENST00000395577 GFM2Q969S9 779 aaKnown RBP7.02□□□□□ -1.29
CDKN3-203ENST00000395577 CDK5RAP3Q96JB5 506 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 MANSC1Q9H8J5 431 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 TDP1Q9NUW8 608 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 VWA7Q9Y334 891 aa7.02□□□□□ -1.29
CDKN3-203ENST00000395577 CEP170Q5SW79 1584 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms