RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 DDX5P17844 614 aaKnown RBP12.97□□□□□ -0.33
SIN3A-202ENST00000394947 VPS50Q96JG6 964 aa12.97□□□□□ -0.33
SIN3A-202ENST00000394947 APOL5Q9BWW9 433 aa12.97□□□□□ -0.33
SIN3A-202ENST00000394947 COPG1Q9Y678 874 aaKnown RBP12.97□□□□□ -0.33
SIN3A-202ENST00000394947 ZC3H4Q9UPT8 1303 aaKnown RBP12.97□□□□□ -0.33
SIN3A-202ENST00000394947 IFT140Q96RY7 1462 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 ANO5Q75V66 913 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 TMC4Q7Z404 712 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.96□□□□□ -0.33
SIN3A-202ENST00000394947 SH3GL2Q99962 352 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 KDM4CQ9H3R0 1056 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 ASNSD1Q9NWL6 643 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 SMNDC1O75940 238 aaKnown RBP eCLIP12.96□□□□□ -0.33
SIN3A-202ENST00000394947 FOSP01100 380 aaPredicted RBP12.96□□□□□ -0.33
SIN3A-202ENST00000394947 TYK2P29597 1187 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 ETFBP38117 255 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 PARP9Q8IXQ6 854 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 DCUN1D1Q96GG9 259 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 DTNAQ9Y4J8 743 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 RSPH10B2B2RC85 870 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 H0Y626 953 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 TRIM16O95361 564 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 RSPH10BP0C881 870 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 TMEM62Q0P6H9 643 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 SLC44A2Q8IWA5 706 aaPredicted RBP12.96□□□□□ -0.33
SIN3A-202ENST00000394947 URGCPQ8TCY9 931 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 IL13P35225 146 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 ZNF564Q8TBZ8 553 aaPredicted RBP12.96□□□□□ -0.33
SIN3A-202ENST00000394947 OTUB1Q96FW1 271 aaPredicted RBP12.96□□□□□ -0.33
SIN3A-202ENST00000394947 DDX47Q9H0S4 455 aaKnown RBP12.96□□□□□ -0.33
SIN3A-202ENST00000394947 ARHGEF3Q9NR81 526 aa12.96□□□□□ -0.33
SIN3A-202ENST00000394947 LOC102724159A0A0B4J2E5 919 aa12.96□□□□□ -0.34
SIN3A-202ENST00000394947 KCNN4O15554 427 aa12.96□□□□□ -0.34
SIN3A-202ENST00000394947 TBC1D12O60347 775 aa12.96□□□□□ -0.34
SIN3A-202ENST00000394947 MMP1P03956 469 aa12.96□□□□□ -0.34
SIN3A-202ENST00000394947 BRAFP15056 766 aa12.96□□□□□ -0.34
SIN3A-202ENST00000394947 IL10P22301 178 aa12.96□□□□□ -0.34
SIN3A-202ENST00000394947 GNA15P30679 374 aa12.96□□□□□ -0.34
SIN3A-202ENST00000394947 PWP2Q15269 919 aaKnown RBP12.96□□□□□ -0.34
SIN3A-202ENST00000394947 FAM102AQ5T9C2 384 aaPredicted RBP12.96□□□□□ -0.34
SIN3A-202ENST00000394947 LONP2Q86WA8 852 aa12.96□□□□□ -0.34
SIN3A-202ENST00000394947 MTERF3Q96E29 417 aa12.96□□□□□ -0.34
SIN3A-202ENST00000394947 SH2D3AQ9BRG2 576 aa12.96□□□□□ -0.34
SIN3A-202ENST00000394947 C20orf96Q9NUD7 363 aaPredicted RBP12.96□□□□□ -0.34
SIN3A-202ENST00000394947 KDM5BQ9UGL1 1544 aa12.96□□□□□ -0.34
SIN3A-202ENST00000394947 NMT2O60551 498 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 CRKLP46109 303 aaKnown RBP12.95□□□□□ -0.34
SIN3A-202ENST00000394947 GUCY1A3Q02108 690 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 PDAP1Q13442 181 aaKnown RBP12.95□□□□□ -0.34
SIN3A-202ENST00000394947 GALNT17Q6IS24 598 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 TMEM245Q9H330 911 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 ZFYVE1Q9HBF4 777 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 TCP11X1B4DZS4 312 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 ZNF500O60304 480 aaPredicted RBP12.95□□□□□ -0.34
SIN3A-202ENST00000394947 PPP6R2O75170 966 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 PRR29P0C7W0 189 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 HORMAD1Q86X24 394 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 EFHBQ8N7U6 833 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 APPL2Q8NEU8 664 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 BRIP1Q9BX63 1249 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 FARP1Q9Y4F1 1045 aaPredicted RBP12.95□□□□□ -0.34
SIN3A-202ENST00000394947 CDC25BP30305 580 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 AVPR1AP37288 418 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 RGS7P49802 495 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 PROSER3Q2NL68 480 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 KRT77Q7Z794 578 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 SFR1Q86XK3 245 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 WDR11Q9BZH6 1224 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 DBR1Q9UK59 544 aaKnown RBP12.95□□□□□ -0.34
SIN3A-202ENST00000394947 AIM2O14862 343 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 ANGPT2O15123 496 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 LARGE1O95461 756 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 CYP2D6P10635 497 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 SULT1E1P49888 294 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 NME5P56597 212 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 MTMR1Q13613 665 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 DIS3LQ8TF46 1054 aaKnown RBP12.95□□□□□ -0.34
SIN3A-202ENST00000394947 FOXP1Q9H334 677 aaPredicted RBP12.95□□□□□ -0.34
SIN3A-202ENST00000394947 DLGAP3O95886 979 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 S100A5P33763 92 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 ZNF235Q14590 738 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 PID1Q7Z2X4 250 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 CCDC103Q8IW40 242 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 CCDC33Q8N5R6 958 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 USP44Q9H0E7 712 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 ZCCHC17Q9NP64 241 aaKnown RBP12.95□□□□□ -0.34
SIN3A-202ENST00000394947 ZNF185O15231 689 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 TBC1D4O60343 1298 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 KRT38O76015 456 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 PGM1P36871 562 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 USP14P54578 494 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 BRD8Q9H0E9 1235 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 N6AMT1Q9Y5N5 214 aa12.95□□□□□ -0.34
SIN3A-202ENST00000394947 ZBTB22O15209 634 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 SKAP2O75563 359 aaPredicted RBP12.94□□□□□ -0.34
SIN3A-202ENST00000394947 SLC39A14Q15043 492 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 TRIP4Q15650 581 aaPredicted RBP12.94□□□□□ -0.34
SIN3A-202ENST00000394947 IL17RAQ96F46 866 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 PLEKHA8Q96JA3 519 aa12.94□□□□□ -0.34
SIN3A-202ENST00000394947 IPO5O00410 1097 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms