RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 ZNF212Q9UDV6 495 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 TMEM94Q12767 1356 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 EDC4Q6P2E9 1401 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 SMIM31A0A1B0GVY4 71 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 SFI1A8K8P3 1242 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 GSC2O15499 205 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 RIPK2O43353 540 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 MAP3K10Q02779 954 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 PTPN12Q05209 780 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 DLG1Q12959 904 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 ZNF211Q13398 564 aaPredicted RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 PDCD4Q53EL6 469 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 SPTY2D1Q68D10 685 aaPredicted RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 PDXDC1Q6P996 788 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 PEX5LQ8IYB4 626 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 METTL25Q8N6Q8 603 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 ZFP28Q8NHY6 868 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 FAM161BQ96MY7 647 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 GPR101Q96P66 508 aaPredicted RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 ARL8BQ9NVJ2 186 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 TRAF3IP3Q9Y228 551 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 HBS1LQ9Y450 684 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 SPAG7O75391 227 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 IFIT1P09914 478 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 KRT13P13646 458 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 ANPEPP15144 967 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 ENDOUP21128 410 aaKnown RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 CCT7Q99832 543 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 ERP44Q9BS26 406 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 STMN4Q9H169 189 aaPredicted RBP13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 GBA3Q9H227 469 aa13.37□□□□□ -0.27
SLC28A1-203ENST00000394573 TSPY2A6NKD2 308 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 RASA4BC9J798 803 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 RASA4O43374 803 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 HAUS5O94927 633 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 TSPY3P0CV98 308 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 TSPY8P0CW00 308 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 FCER1AP12319 257 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 MZF1P28698 734 aaPredicted RBP13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 SLC5A2P31639 672 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 MCM7P33993 719 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 EIF4A1P60842 406 aaKnown RBP13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 TSPY1Q01534 308 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 MED21Q13503 144 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 ACVR2BQ13705 512 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 BCL2A1Q16548 175 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 IL17AQ16552 155 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 SLC9C1Q4G0N8 1177 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 LPCAT4Q643R3 524 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 KSR2Q6VAB6 950 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 Q6ZNX1 250 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 CCDC125Q86Z20 511 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 NELFCDQ8IXH7 590 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 TRIM22Q8IYM9 498 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 CRACR2BQ8N4Y2 399 aaPredicted RBP13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 PPP4R1Q8TF05 950 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 CLPTM1LQ96KA5 538 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 SLITRK6Q9H5Y7 841 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 TRNAU1APQ9NX07 287 aaKnown RBP13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 PPM1HQ9ULR3 514 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 TRIM64CA6NLI5 447 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 RAPGEF1Q13905 1077 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 INAQ16352 499 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 FAM209AQ5JX71 171 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 PEX26Q7Z412 305 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 NUP93Q8N1F7 819 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 SAMD3Q8N6K7 520 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 MAGEB18Q96M61 343 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 ADAM33Q9BZ11 813 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 NDE1Q9NXR1 346 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 AIPL1Q9NZN9 384 aa13.36□□□□□ -0.27
SLC28A1-203ENST00000394573 CCDC188H7C350 402 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 HSPA8P11142 646 aaKnown RBP13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 ENTPD1P49961 510 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 STK4Q13043 487 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 MTMR2Q13614 643 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 CTC1Q2NKJ3 1217 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 MYLK3Q32MK0 819 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 SFT2D3Q587I9 215 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 FIGNQ5HY92 759 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 DUPD1Q68J44 220 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 PRUNE1Q86TP1 453 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 EXOC8Q8IYI6 725 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 BTBD10Q9BSF8 475 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 POLR3CQ9BUI4 534 aaPredicted RBP13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 NPHS2Q9NP85 383 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 ARMCX3Q9UH62 379 aaPredicted RBP13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 SYNPO2Q9UMS6 1093 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 PCDHGB4Q9UN71 923 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 PCDHGB5Q9Y5G0 923 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 WDR91A4D1P6 747 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 E9PBE3 544 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 PRPF3O43395 683 aaKnown RBP13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 DCTN3O75935 186 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 EYA4O95677 639 aa13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 TKTP29401 623 aaKnown RBP13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 HIRAP54198 1017 aaPredicted RBP13.35□□□□□ -0.27
SLC28A1-203ENST00000394573 TGFBIQ15582 683 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms