RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 CYFIP1Q7L576 1253 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 NLRX1Q86UT6 975 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 FMNL3Q8IVF7 1028 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 RAPGEF5Q92565 580 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 KIFAP3Q92845 792 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 MXRA8Q9BRK3 442 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 FAM213AQ9BRX8 229 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 VCPKMTQ9H867 229 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 TNRC6CQ9HCJ0 1690 aaKnown RBP11.33□□□□□ -0.6
ACTN1-203ENST00000394419 BRD2P25440 801 aaKnown RBP11.33□□□□□ -0.6
ACTN1-203ENST00000394419 ACTN3Q08043 901 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-203ENST00000394419 DAB2IPQ5VWQ8 1189 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 GDAP1Q8TB36 358 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 CPA5Q8WXQ8 436 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 ATG4AQ8WYN0 398 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 ZNF70Q9UC06 446 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-203ENST00000394419 ODF2LQ9ULJ1 636 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 RASGRF2O14827 1237 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 PYGMP11217 842 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 CHN1P15882 459 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 HNRNPH1P31943 449 aaKnown RBP11.33□□□□□ -0.6
ACTN1-203ENST00000394419 HSPA1LP34931 641 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 JAM2P57087 298 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 PPP2R5AQ15172 486 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 E2F5Q15329 346 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 EPS8L3Q8TE67 593 aaKnown RBP11.33□□□□□ -0.6
ACTN1-203ENST00000394419 THOC1Q96FV9 657 aaKnown RBP11.33□□□□□ -0.6
ACTN1-203ENST00000394419 HES6Q96HZ4 224 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 MKNK1Q9BUB5 465 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 CARD9Q9H257 536 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 HERC5Q9UII4 1024 aaKnown RBP11.33□□□□□ -0.6
ACTN1-203ENST00000394419 GTPBP10A4D1E9 387 aaKnown RBP11.32□□□□□ -0.6
ACTN1-203ENST00000394419 ENTPD3O75355 529 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 IFI35P80217 286 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-203ENST00000394419 SNRNP35Q16560 246 aaKnown RBP11.32□□□□□ -0.6
ACTN1-203ENST00000394419 LONRF1Q17RB8 773 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 CYP4F22Q6NT55 531 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 FOXR2Q6PJQ5 311 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 ZNF365Q70YC5 407 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 MBOAT7Q96N66 472 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 TAAR1Q96RJ0 339 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 ANKFY1Q9P2R3 1169 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 SEPT9Q9UHD8 586 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-203ENST00000394419 BAIAP2L1Q9UHR4 511 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 TRPC6Q9Y210 931 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 TMX2Q9Y320 296 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 SYNGAP1Q96PV0 1343 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 COL22A1Q8NFW1 1626 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-203ENST00000394419 DDX60LQ5H9U9 1706 aaKnown RBP11.32□□□□□ -0.6
ACTN1-203ENST00000394419 SMCHD1A6NHR9 2005 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 PASKQ96RG2 1323 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 TCRBV7S2A1N4TA0A589 114 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 ECEL1O95672 775 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 MAPK7Q13164 816 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 RASA3Q14644 834 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 QPCTQ16769 361 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 WDR44Q5JSH3 913 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 LRIG3Q6UXM1 1119 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 KAT2BQ92831 832 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 SLC5A5Q92911 643 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 SEC16BQ96JE7 1060 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 KLHL11Q9NVR0 708 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 EXOC7Q9UPT5 735 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 MYCNP04198 464 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-203ENST00000394419 CLTAP09496 248 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 RWDD2BP57060 319 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 MTERF2Q49AM1 385 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 RNF207Q6ZRF8 634 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 MREGQ8N565 214 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 PRMT1Q99873 361 aaKnown RBP11.32□□□□□ -0.6
ACTN1-203ENST00000394419 EFCC1Q9HA90 598 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 INTUQ9ULD6 942 aa11.32□□□□□ -0.6
ACTN1-203ENST00000394419 THAP12O43422 761 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 RTN2O75298 545 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 ATF7P17544 494 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-203ENST00000394419 RARRES1P49788 294 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 PTENP60484 403 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 PPP2R5CQ13362 524 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 PPP2R5EQ16537 467 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 BMT2Q1RMZ1 405 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 ZNF394Q53GI3 561 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 DCAF12L1Q5VU92 463 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 PRAMEF18Q5VWM3 479 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 LLGL2Q6P1M3 1020 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 USP37Q86T82 979 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 NOP9Q86U38 636 aaKnown RBP11.31□□□□□ -0.6
ACTN1-203ENST00000394419 FAM160B2Q86V87 743 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 TAS1R2Q8TE23 839 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 TCP11Q8WWU5 503 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 TBC1D31Q96DN5 1066 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 TMEM117Q9H0C3 514 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 LRRC4CQ9HCJ2 640 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 C1orf112Q9NSG2 853 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 GABBR1Q9UBS5 961 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 DDX20Q9UHI6 824 aaKnown RBP11.31□□□□□ -0.6
ACTN1-203ENST00000394419 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-203ENST00000394419 FRMPD4Q14CM0 1322 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 A0A0A6YYK5 440 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-203ENST00000394419 LRRIQ4A6NIV6 560 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 MIF4GDA9UHW6 222 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms