RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 TSPAN17Q96FV3 270 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 ACCSQ96QU6 501 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 CACNA2D2Q9NY47 1150 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 KCNJ14Q9UNX9 436 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 FTCDO95954 541 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 SERPINB8P50452 374 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 PTGDRQ13258 359 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 C6orf10Q5SRN2 563 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 ZNF658Q5TYW1 1059 aaPredicted RBP14.15□□□□□ -0.14
USP49-203ENST00000394253 EXD1Q8NHP7 514 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 CDYLQ9Y232 598 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 SNX14Q9Y5W7 946 aa14.15□□□□□ -0.14
USP49-203ENST00000394253 SOWAHDA6NJG2 315 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 SGSM2O43147 1006 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 EIF2B5Q13144 721 aaKnown RBP14.14□□□□□ -0.15
USP49-203ENST00000394253 TNFAIP1Q13829 316 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 SUGCTQ9HAC7 445 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 FAM153AQ9UHL3 310 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 FARP1Q9Y4F1 1045 aaPredicted RBP14.14□□□□□ -0.15
USP49-203ENST00000394253 FANCD2Q9BXW9 1451 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 MED26O95402 600 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 BRAFP15056 766 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 ZNF483Q8TF39 744 aaPredicted RBP14.14□□□□□ -0.15
USP49-203ENST00000394253 PPP1R2P1Q96PQ5 205 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 UBE2TQ9NPD8 197 aaPredicted RBP14.14□□□□□ -0.15
USP49-203ENST00000394253 CDY2AQ9Y6F7 541 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 CDY1Q9Y6F8 540 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 BTN3A3O00478 584 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 TNPO2O14787 897 aaKnown RBP14.14□□□□□ -0.15
USP49-203ENST00000394253 LCA5LO95447 670 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 LRRC31Q6UY01 552 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 EFHD2Q96C19 240 aaPredicted RBP14.14□□□□□ -0.15
USP49-203ENST00000394253 LRRC53A6NM62 1247 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 NSMFQ6X4W1 530 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 CCDC81Q6ZN84 652 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 PLA2G4DQ86XP0 818 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 ANKRD13CQ8N6S4 541 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 THAP9Q9H5L6 903 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 DTNAQ9Y4J8 743 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 SNAPC4Q5SXM2 1469 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 SUPT3HB4E1H0 165 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 ITGA1P56199 1179 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 SPATA21Q7Z572 469 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 SNRNP27Q8WVK2 155 aaKnown RBP14.14□□□□□ -0.15
USP49-203ENST00000394253 C17orf80Q9BSJ5 609 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 NRBP2Q9NSY0 501 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 KIAA1024Q9UPX6 916 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 USP15Q9Y4E8 981 aaPredicted RBP14.14□□□□□ -0.15
USP49-203ENST00000394253 DYNC1LI2O43237 492 aaPredicted RBP14.14□□□□□ -0.15
USP49-203ENST00000394253 PSTPIP1O43586 416 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 MLNP12872 115 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 CHRNA3P32297 505 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 COPB2P35606 906 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 KRT20P35900 424 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 PEG10Q86TG7 708 aaKnown RBP14.14□□□□□ -0.15
USP49-203ENST00000394253 STK39Q9UEW8 545 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 HMOX2P30519 316 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 TFAMQ00059 246 aaKnown RBP14.14□□□□□ -0.15
USP49-203ENST00000394253 PTPN12Q05209 780 aaKnown RBP14.14□□□□□ -0.15
USP49-203ENST00000394253 ITGB3BPQ13352 177 aaPredicted RBP14.14□□□□□ -0.15
USP49-203ENST00000394253 NGLY1Q96IV0 654 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 PARVAQ9NVD7 372 aa14.14□□□□□ -0.15
USP49-203ENST00000394253 SEPT9Q9UHD8 586 aaPredicted RBP14.14□□□□□ -0.15
USP49-203ENST00000394253 GFPT2O94808 682 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 P2RX5Q93086 422 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 AS3MTQ9HBK9 375 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 RTCBQ9Y3I0 505 aaKnown RBP14.13□□□□□ -0.15
USP49-203ENST00000394253 RP1L1Q8IWN7 2480 aaPredicted RBP14.13□□□□□ -0.15
USP49-203ENST00000394253 ABCC5O15440 1437 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 FAM135BQ49AJ0 1406 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 FKBP9O95302 570 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 ATP6V1B1P15313 513 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 GPS1Q13098 491 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 TRIP10Q15642 601 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 RSBN1Q5VWQ0 802 aaPredicted RBP14.13□□□□□ -0.15
USP49-203ENST00000394253 FKBP9P1Q75LS8 142 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 MRPL50Q8N5N7 158 aaKnown RBP14.13□□□□□ -0.15
USP49-203ENST00000394253 LIMA1Q9UHB6 759 aaKnown RBP14.13□□□□□ -0.15
USP49-203ENST00000394253 MROH5Q6ZUA9 1318 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 MYH13Q9UKX3 1938 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 FAM47CQ5HY64 1035 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 ZSCAN10Q96SZ4 725 aaPredicted RBP14.13□□□□□ -0.15
USP49-203ENST00000394253 PRMT1Q99873 361 aaKnown RBP14.13□□□□□ -0.15
USP49-203ENST00000394253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.13□□□□□ -0.15
USP49-203ENST00000394253 SPTLC3Q9NUV7 552 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 FAM170AA1A519 330 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 TYK2P29597 1187 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 FBXO42Q6P3S6 717 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 KIAA0408Q6ZU52 694 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 C18orf25Q96B23 403 aaPredicted RBP14.13□□□□□ -0.15
USP49-203ENST00000394253 RBBP8Q99708 897 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 GALNT8Q9NY28 637 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 VAV3Q9UKW4 847 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 CACNA1FO60840 1977 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 NEMP1O14524 444 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 SLC16A1P53985 500 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 RCN1Q15293 331 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 C19orf44Q9H6X5 657 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 AKT3Q9Y243 479 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 SPAG17Q6Q759 2223 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms