RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 NT5DC1Q5TFE4 455 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 ATF7IP2Q5U623 682 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 GLB1LQ6UWU2 654 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 HAUS6Q7Z4H7 955 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 APBB1IPQ7Z5R6 666 aaPredicted RBP20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 SMG8Q8ND04 991 aaKnown RBP20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 SLC17A8Q8NDX2 589 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 FBXO22Q8NEZ5 403 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 MYLIPQ8WY64 445 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 DNAJC19Q96DA6 116 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 MRPL4Q9BYD3 311 aaKnown RBP20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 PDZD7Q9H5P4 517 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 KBTBD4Q9NVX7 518 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 USP20Q9Y2K6 914 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 IPPQ9Y573 584 aa20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 FNDC1Q4ZHG4 1894 aaPredicted RBP20.89■□□□□ 0.93
PDLIM7-204ENST00000393546 CHD9Q3L8U1 2897 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 A0A1B0GVL5 298 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 A0A1W2PQ27 194 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 A0A1W2PQ64 194 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 A0A1W2PQD8 194 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 EDN1P05305 212 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 RB1P06400 928 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 MAPTP10636 758 aaKnown RBP20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 IDEP14735 1019 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 GAP43P17677 238 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 ABCD1P33897 745 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 CTNNB1P35222 781 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 AGMOQ6ZNB7 445 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 TAS1R3Q7RTX0 852 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 FAM178BQ8IXR5 827 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 CEP57L1Q8IYX8 460 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 STAMQ92783 540 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 ACO2Q99798 780 aaKnown RBP20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 RSAD1Q9HA92 442 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 AAASQ9NRG9 546 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 TYW1Q9NV66 732 aaKnown RBP20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 SEL1LQ9UBV2 794 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 TNFSF13BQ9Y275 285 aa20.88■□□□□ 0.93
PDLIM7-204ENST00000393546 GOLGA6L4A6NEF3 574 aa20.87■□□□□ 0.93
PDLIM7-204ENST00000393546 K7ENM7 598 aa20.87■□□□□ 0.93
PDLIM7-204ENST00000393546 RFXAPO00287 272 aa20.87■□□□□ 0.93
PDLIM7-204ENST00000393546 OFD1O75665 1012 aa20.87■□□□□ 0.93
PDLIM7-204ENST00000393546 PFKFB1P16118 471 aa20.87■□□□□ 0.93
PDLIM7-204ENST00000393546 TPRNQ4KMQ1 711 aa20.87■□□□□ 0.93
PDLIM7-204ENST00000393546 KCNN1Q92952 543 aa20.87■□□□□ 0.93
PDLIM7-204ENST00000393546 TARS2Q9BW92 718 aaKnown RBP20.87■□□□□ 0.93
PDLIM7-204ENST00000393546 MRPL9Q9BYD2 267 aaKnown RBP20.87■□□□□ 0.93
PDLIM7-204ENST00000393546 USP25Q9UHP3 1055 aa20.87■□□□□ 0.93
PDLIM7-204ENST00000393546 HES2Q9Y543 173 aa20.87■□□□□ 0.93
PDLIM7-204ENST00000393546 EPOPA6NHQ4 379 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 MEIS3P2A8K0S8 358 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 FOSL2P15408 326 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 DCAF4L1Q3SXM0 396 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 HERC4Q5GLZ8 1057 aaPredicted RBP20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 NOMO2Q5JPE7 1267 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 EEF1DP3Q658K8 133 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 CCDC65Q8IXS2 484 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 LRRC43Q8N309 656 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 URGCPQ8TCY9 931 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 TCHPQ9BT92 498 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 APOL6Q9BWW8 343 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 PLVAPQ9BX97 442 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 RNF39Q9H2S5 420 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 PANK4Q9NVE7 773 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 KANSL3Q9P2N6 904 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 SERTAD1Q9UHV2 236 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 HPSEQ9Y251 543 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 INPP5FQ9Y2H2 1132 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 GIT1Q9Y2X7 761 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 PCDHB12Q9Y5F1 795 aa20.86■□□□□ 0.93
PDLIM7-204ENST00000393546 FAM237AA0A1B0GTK4 181 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 C5orf67F2Z3F1 127 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 SLFN14P0C7P3 912 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 LINC00271P0C7V0 271 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 IGFBP4P22692 258 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 NMT1P30419 496 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 SYKP43405 635 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 GPM6BQ13491 265 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 LRRC55Q6ZSA7 311 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 SFR1Q86XK3 245 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 FSIP1Q8NA03 581 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 MRPS27Q92552 414 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 C7orf25Q9BPX7 421 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 TRIM9Q9C026 710 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 NXF3Q9H4D5 531 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 CWH43Q9H720 699 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 PARP2Q9UGN5 583 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 TBX20Q9UMR3 447 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 STXBP5LQ9Y2K9 1186 aa20.85■□□□□ 0.93
PDLIM7-204ENST00000393546 RALGAPA2Q2PPJ7 1873 aa20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 NLRC5Q86WI3 1866 aa20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 H3BNC9 293 aa20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 GTPBP6O43824 516 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 LAG3P18627 525 aa20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 AKAP5P24588 427 aa20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 AFMP43652 599 aa20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 GTF2BQ00403 316 aa20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 RNASELQ05823 741 aaKnown RBP20.84■□□□□ 0.93
PDLIM7-204ENST00000393546 ADGRE1Q14246 886 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms