RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 ARHGEF26Q96DR7 871 aa27.69■■■□□ 2.02
SMARCD3-203ENST00000392811 IFT74Q96LB3 600 aa27.69■■■□□ 2.02
SMARCD3-203ENST00000392811 MFSD14AQ96MC6 490 aa27.69■■■□□ 2.02
SMARCD3-203ENST00000392811 MYH9P35579 1960 aaKnown RBP27.69■■■□□ 2.02
SMARCD3-203ENST00000392811 HNRNPDLO14979 420 aaKnown RBP27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 CEP104O60308 925 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 ATP4AP20648 1035 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 TAS1R3Q7RTX0 852 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 TMC2Q8TDI7 906 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 KREMEN1Q96MU8 473 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 KRT12Q99456 494 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 ZMYND15Q9H091 742 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 THAP2Q9H0W7 228 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 TOPORSQ9NS56 1045 aaPredicted RBP27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 TMEM59LQ9UK28 342 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 SYNGAP1Q96PV0 1343 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 ZC3H4Q9UPT8 1303 aaKnown RBP27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 A0A0G2JMZ2 1700 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 ADM5C9JUS6 153 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 BUB1BO60566 1050 aaPredicted RBP27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 TNFRSF8P28908 595 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 AARSP49588 968 aaKnown RBP eCLIP27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 ALDH5A1P51649 535 aaPredicted RBP27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 SEPT14Q6ZU15 432 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 ACTRT1Q8TDG2 376 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 TMEM8AQ9HCN3 771 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 ARHGAP28Q9P2N2 729 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 OTOFQ9HC10 1997 aa27.68■■■□□ 2.02
SMARCD3-203ENST00000392811 PAPPA2Q9BXP8 1791 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 ANKRD62A6NC57 917 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 ATG7O95352 703 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 GLI1P08151 1106 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 USP8P40818 1118 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 CYP24A1Q07973 514 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 EMC2Q15006 297 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 BRDTQ58F21 947 aaPredicted RBP27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 HSP90B2PQ58FF3 399 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 PPM1KQ8N3J5 372 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 ZNF302Q9NR11 478 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 COQ4Q9Y3A0 265 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 MAFBQ9Y5Q3 323 aaPredicted RBP27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 CSADQ9Y600 493 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 SBF1O95248 1867 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 PPATQ06203 517 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 RIOX2Q8IUF8 465 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 FAM71AQ8IYT1 594 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 RPUSD2Q8IZ73 545 aaKnown RBP27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 GPD1LQ8N335 351 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 FAM71BQ8TC56 605 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 BICD1Q96G01 975 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 HES6Q96HZ4 224 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 MED4Q9NPJ6 270 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 VPS18Q9P253 973 aa27.67■■■□□ 2.02
SMARCD3-203ENST00000392811 GARTP22102 1010 aa27.66■■■□□ 2.02
SMARCD3-203ENST00000392811 POLGP54098 1239 aaPredicted RBP27.66■■■□□ 2.02
SMARCD3-203ENST00000392811 SND1Q7KZF4 910 aaKnown RBP eCLIP27.66■■■□□ 2.02
SMARCD3-203ENST00000392811 ADARB2Q9NS39 739 aaKnown RBP27.66■■■□□ 2.02
SMARCD3-203ENST00000392811 FBXO40Q9UH90 709 aa27.66■■■□□ 2.02
SMARCD3-203ENST00000392811 HEXIM1O94992 359 aaKnown RBP27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 SGPL1O95470 568 aa27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 OATP04181 439 aa27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 GPC3P51654 580 aa27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 TNNC1P63316 161 aa27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 GDF3Q9NR23 364 aa27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 AMFRQ9UKV5 643 aa27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 FAN1Q9Y2M0 1017 aa27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 EPHB4P54760 987 aa27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 MFAP3P55082 362 aa27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 GADL1Q6ZQY3 521 aa27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 IFT20Q8IY31 132 aa27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 TAS1R2Q8TE23 839 aa27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 SCFD2Q8WU76 684 aa27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 DCPSQ96C86 337 aaKnown RBP27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.65■■■□□ 2.02
SMARCD3-203ENST00000392811 H0YCG3 227 aa27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 PGRMC1O00264 195 aaKnown RBP27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 GTF2H1P32780 548 aa27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 NOP9Q86U38 636 aaKnown RBP27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 SULF1Q8IWU6 871 aa27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 FBXL13Q8NEE6 735 aa27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 HELQQ8TDG4 1101 aa27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 EPS8L1Q8TE68 723 aa27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 SHC3Q92529 594 aa27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 TMEM143Q96AN5 459 aa27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 FAM213AQ9BRX8 229 aa27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 ISCUQ9H1K1 167 aa27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 PLEKHA4Q9H4M7 779 aa27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 NOCTQ9UK39 431 aaKnown RBP27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 ADAM21Q9UKJ8 722 aa27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 COG5Q9UP83 839 aa27.64■■■□□ 2.02
SMARCD3-203ENST00000392811 ZSCAN5CA6NGD5 496 aaPredicted RBP27.63■■■□□ 2.01
SMARCD3-203ENST00000392811 SYF2O95926 243 aaKnown RBP27.63■■■□□ 2.01
SMARCD3-203ENST00000392811 FTLP02792 175 aaPredicted RBP27.63■■■□□ 2.01
SMARCD3-203ENST00000392811 CHRNB2P17787 502 aa27.63■■■□□ 2.01
SMARCD3-203ENST00000392811 CYP2C19P33261 490 aa27.63■■■□□ 2.01
SMARCD3-203ENST00000392811 USP37Q86T82 979 aa27.63■■■□□ 2.01
SMARCD3-203ENST00000392811 KLHL7Q8IXQ5 586 aa27.63■■■□□ 2.01
SMARCD3-203ENST00000392811 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.63■■■□□ 2.01
SMARCD3-203ENST00000392811 SPATC1LQ9H0A9 340 aa27.63■■■□□ 2.01
SMARCD3-203ENST00000392811 EPB41L5Q9HCM4 733 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms