RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 IRF2BP2Q7Z5L9 587 aa12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 USP6NLQ92738 828 aa12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 C16orf70Q9BSU1 422 aa12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 TSGA10Q9BZW7 698 aa12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 CCDC113Q9H0I3 377 aa12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 RNPEPQ9H4A4 650 aa12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 SUGCTQ9HAC7 445 aa12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 ZFYVE28Q9HCC9 887 aa12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 AJAP1Q9UKB5 411 aaPredicted RBP12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 ZHX1Q9UKY1 873 aaPredicted RBP12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 EVPLQ92817 2033 aa12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 COL1A2P08123 1366 aa12.44□□□□□ -0.42
SMARCAL1-203ENST00000392128 KRT86O43790 486 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 ABL1P00519 1130 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 GTF2H1P32780 548 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 GCLMP48507 274 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 MXI1P50539 228 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 CYP27A1Q02318 531 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 KLHL30Q0D2K2 578 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 FMNL3Q8IVF7 1028 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 JAKMIP2Q96AA8 810 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 STK33Q9BYT3 514 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 TMEM117Q9H0C3 514 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 C2orf40Q9H1Z8 148 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 PCDHA13Q9Y5I0 950 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 MGAMO43451 1857 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 ZNF233A6NK53 670 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 LRRIQ3A6PVS8 624 aaPredicted RBP12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 C22orf31O95567 290 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 MMP3P08254 477 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 ANXA13P27216 316 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 ZNF569Q5MCW4 686 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 CCDC122Q5T0U0 273 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 GJB7Q6PEY0 223 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 ZPBP2Q6X784 338 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 ZBTB8OSQ8IWT0 167 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 LRRC71Q8N4P6 559 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 TRAPPC12Q8WVT3 735 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 HHIPL1Q96JK4 782 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 IFIH1Q9BYX4 1025 aaKnown RBP12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 TMEM8AQ9HCN3 771 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 SUCLA2Q9P2R7 463 aaPredicted RBP12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 DNAJC12Q9UKB3 198 aa12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 ZNF215Q9UL58 517 aaPredicted RBP12.43□□□□□ -0.42
SMARCAL1-203ENST00000392128 F8VZ95 297 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 ASAP2O43150 1006 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 CTIFO43310 598 aaKnown RBP12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 LDHAP00338 332 aaKnown RBP12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 INSRRP14616 1297 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 STAT1P42224 750 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 TFDP1Q14186 410 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 KRT39Q6A163 491 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 EFCAB12Q6NXP0 572 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 TXLNBQ8N3L3 684 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 OR6J1Q8NGC5 347 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 VTI1AQ96AJ9 217 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 FAM213AQ9BRX8 229 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 TARS2Q9BW92 718 aaKnown RBP12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 AGO2Q9UKV8 859 aaKnown RBP12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 COQ4Q9Y3A0 265 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 A0A0B4J269 797 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 RCCD1A6NED2 376 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 MAGEB2O15479 319 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 MSCO60682 206 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 EDN1P05305 212 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 ZNF286BP0CG31 522 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 FERP16591 822 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 TM4SF4P48230 202 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 CLDN10P78369 228 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 ARID5AQ03989 594 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 GFPT1Q06210 699 aaPredicted RBP12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 KIF5AQ12840 1032 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 SLC18A3Q16572 532 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 OLFML2BQ68BL8 750 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 PHLDB3Q6NSJ2 640 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 GPIHBP1Q8IV16 184 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 RNF149Q8NC42 400 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 SOCS4Q8WXH5 440 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 CCDC127Q96BQ5 260 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 MRPL4Q9BYD3 311 aaKnown RBP12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 HAPLN2Q9GZV7 340 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 LACRTQ9GZZ8 138 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 TRIM10Q9UDY6 481 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 GUCA1BQ9UMX6 200 aa12.42□□□□□ -0.42
SMARCAL1-203ENST00000392128 H3BRB1 525 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 DYNC1I1O14576 645 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 PJA2O43164 708 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 ADCY6O43306 1168 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 RRP9O43818 475 aaKnown RBP12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 SRGAP2CP0DJJ0 459 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 SOX5P35711 763 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 RGS2P41220 211 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 TNFAIP2Q03169 654 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 CRHR2Q13324 411 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 DRAP1Q14919 205 aaPredicted RBP12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 PSMD6Q15008 389 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 DGKDQ16760 1214 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 RHPN2Q8IUC4 686 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 SLC35F6Q8N357 371 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 LINC01465Q8N7H1 131 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms