RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 OSBPL8Q9BZF1 889 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 KRT16P08779 473 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 SEMA3FQ13275 785 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 KYNUQ16719 465 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 PRPF39Q86UA1 669 aaKnown RBP13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 CCDC88AQ3V6T2 1871 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 CCDC78A2IDD5 438 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 MTF1Q14872 753 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 JDP2Q8WYK2 163 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 TMEM245Q9H330 911 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 ADAM22Q9P0K1 906 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 TFDP1Q14186 410 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 TTC33Q6PID6 262 aaPredicted RBP13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 FSD1LQ9BXM9 530 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 SUGCTQ9HAC7 445 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 MPP6Q9NZW5 540 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 SRGAP2CP0DJJ0 459 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 WDR11Q9BZH6 1224 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 SH3GLB2Q9NR46 395 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 CPSF3Q9UKF6 684 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 ZIM3Q96PE6 472 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 LBHD1Q9BQE6 289 aaPredicted RBP13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 NSMCE4AQ9NXX6 385 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 SLC12A6Q9UHW9 1150 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 FRMPD1Q5SYB0 1578 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 LOXHD1Q8IVV2 1947 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 F8W8V4 182 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 ST13P50502 369 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 KIAA1755Q5JYT7 1200 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 NCAPG2Q86XI2 1143 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 ZNF513Q8N8E2 541 aaPredicted RBP13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 C4BPBP20851 252 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 TARSP26639 723 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 TFAMQ00059 246 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 TRADDQ15628 312 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 LONRF1Q17RB8 773 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 ARIH1Q9Y4X5 557 aaPredicted RBP13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 UHRF1BP1LA0JNW5 1464 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 ZSCAN9O15535 394 aaPredicted RBP13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 MYBL1P10243 752 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 KCNH2Q12809 1159 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 CDO1Q16878 200 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 NAALADL2Q58DX5 795 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 PSMC3IPQ9P2W1 217 aaPredicted RBP13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 UBE4BO95155 1302 aa13.13□□□□□ -0.31
SRGAP3-202ENST00000383836 CIAO1O76071 339 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 ZNF18P17022 549 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 COPB2P35606 906 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 NUP107P57740 925 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 FAM160B1Q5W0V3 765 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 MFN1Q8IWA4 741 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 EPAS1Q99814 870 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 LGR6Q9HBX8 967 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 DBR1Q9UK59 544 aaKnown RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 ZMYND8Q9ULU4 1186 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 TMEM120BA0PK00 339 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 EIF2B2P49770 351 aaKnown RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 ABCE1P61221 599 aaKnown RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 NSUN2Q08J23 767 aaKnown RBP eCLIP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 TRIM63Q969Q1 353 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 RUBCNLQ9H714 662 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 TEX33O43247 280 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 WLSQ5T9L3 541 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 SUGP1Q8IWZ8 645 aaKnown RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 RFFLQ8WZ73 363 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 AMNQ9BXJ7 453 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 ALG13Q9NP73 1137 aaKnown RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 DDX56Q9NY93 547 aaKnown RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 UBAP1Q9NZ09 502 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 KLHL8Q9P2G9 620 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 DENND4BO75064 1496 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 AFDNP55196 1824 aaKnown RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 PYGMP11217 842 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 SEC24CP53992 1094 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 PLOD1Q02809 727 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 RIBC1Q8N443 379 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 DCLRE1BQ9H816 532 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 ADGRA3Q8IWK6 1321 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 XPOTO43592 962 aaKnown RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 PHF2O75151 1096 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 LIFRP42702 1097 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 ROR1Q01973 937 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 SEL1LQ9UBV2 794 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 MEIS1O00470 390 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 PAX7P23759 505 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 TYK2P29597 1187 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 ARSEP51690 589 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 ITIH6Q6UXX5 1313 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 OMA1Q96E52 524 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 ROPN1BQ9BZX4 212 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 ROPN1Q9HAT0 212 aaPredicted RBP13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 HEY1Q9Y5J3 304 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 UBN2Q6ZU65 1347 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 STK36Q9NRP7 1315 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 GSNP06396 782 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 CAPN1P07384 714 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 INAQ16352 499 aa13.12□□□□□ -0.31
SRGAP3-202ENST00000383836 CCDC142Q17RM4 750 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms