RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ECSITQ9BQ95 431 aa16.05■□□□□ 0.16
VLDLR-202ENST00000382099 ZDHHC18Q9NUE0 388 aa16.05■□□□□ 0.16
VLDLR-202ENST00000382099 STX18Q9P2W9 335 aaKnown RBP16.05■□□□□ 0.16
VLDLR-202ENST00000382099 ZNF212Q9UDV6 495 aa16.05■□□□□ 0.16
VLDLR-202ENST00000382099 PHLDB2Q86SQ0 1253 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 CCDC125Q86Z20 511 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 KCNN1Q92952 543 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 EBF3Q9H4W6 596 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 METTL14Q9HCE5 456 aaKnown RBP16.04■□□□□ 0.16
VLDLR-202ENST00000382099 NDE1Q9NXR1 346 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 TRAF3IP3Q9Y228 551 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 FER1L4A9Z1Z3 1794 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 CDK4P11802 303 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 ATP6V1B1P15313 513 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 GPSM2P81274 684 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 TBL3Q12788 808 aaKnown RBP16.04■□□□□ 0.16
VLDLR-202ENST00000382099 LLGL1Q15334 1064 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 SPTY2D1Q68D10 685 aaPredicted RBP16.04■□□□□ 0.16
VLDLR-202ENST00000382099 DUPD1Q68J44 220 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 KLHL35Q6PF15 583 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 PPP1R14BQ96C90 147 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 KLRC4O43908 158 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 CCDC22O60826 627 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 GSTT2P0CG29 244 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 GSTT2BP0CG30 244 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 LIFRP42702 1097 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 CPA2P48052 419 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 YARSP54577 528 aaKnown RBP16.04■□□□□ 0.16
VLDLR-202ENST00000382099 BTNL9Q6UXG8 535 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 MFSD6Q6ZSS7 791 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 ZNF654Q8IZM8 581 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 ERLEC1Q96DZ1 483 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.04■□□□□ 0.16
VLDLR-202ENST00000382099 NPHS2Q9NP85 383 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 AMFRQ9UKV5 643 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 PFASO15067 1338 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 UMODL1Q5DID0 1318 aa16.04■□□□□ 0.16
VLDLR-202ENST00000382099 NBPF26B4DH59 902 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 TATP17735 454 aaPredicted RBP16.03■□□□□ 0.16
VLDLR-202ENST00000382099 GRIA2P42262 883 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 NAA20P61599 178 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 ACAP1Q15027 740 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 TBC1D9BQ66K14 1250 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 MORC4Q8TE76 937 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 DGCR14Q96DF8 476 aaKnown RBP16.03■□□□□ 0.16
VLDLR-202ENST00000382099 C18orf8Q96DM3 657 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 AGAP3Q96P47 875 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 UTP6Q9NYH9 597 aaKnown RBP16.03■□□□□ 0.16
VLDLR-202ENST00000382099 PTTG2Q9NZH5 202 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 TMA7Q9Y2S6 64 aaKnown RBP16.03■□□□□ 0.16
VLDLR-202ENST00000382099 BCL9LQ86UU0 1499 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 AMPD1P23109 780 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 HDAC4P56524 1084 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 FOXO4P98177 505 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 ACVR2BQ13705 512 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 DTHD1Q6ZMT9 781 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 CASP10Q92851 521 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 PPP2R3CQ969Q6 453 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 MKNK1Q9BUB5 465 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 ERVK-5Q9HDB9 667 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 CNOT7Q9UIV1 285 aaKnown RBP16.03■□□□□ 0.16
VLDLR-202ENST00000382099 TMED5Q9Y3A6 229 aa16.03■□□□□ 0.16
VLDLR-202ENST00000382099 CETN2P41208 172 aa16.02■□□□□ 0.16
VLDLR-202ENST00000382099 RPL21P46778 160 aaKnown RBP16.02■□□□□ 0.16
VLDLR-202ENST00000382099 SPDYCQ5MJ68 293 aa16.02■□□□□ 0.16
VLDLR-202ENST00000382099 C1orf228Q6PIY5 440 aa16.02■□□□□ 0.16
VLDLR-202ENST00000382099 SLC2A7Q6PXP3 512 aa16.02■□□□□ 0.16
VLDLR-202ENST00000382099 ZDHHC24Q6UX98 284 aa16.02■□□□□ 0.16
VLDLR-202ENST00000382099 NLRP9Q7RTR0 991 aa16.02■□□□□ 0.16
VLDLR-202ENST00000382099 MRRFQ96E11 262 aaKnown RBP16.02■□□□□ 0.16
VLDLR-202ENST00000382099 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.02■□□□□ 0.16
VLDLR-202ENST00000382099 NWD2Q9ULI1 1742 aa16.02■□□□□ 0.16
VLDLR-202ENST00000382099 PORP16435 677 aaPredicted RBP16.02■□□□□ 0.16
VLDLR-202ENST00000382099 HOXD11P31277 338 aaPredicted RBP16.02■□□□□ 0.16
VLDLR-202ENST00000382099 IL15P40933 162 aaPredicted RBP16.02■□□□□ 0.16
VLDLR-202ENST00000382099 PDE1BQ01064 536 aa16.02■□□□□ 0.16
VLDLR-202ENST00000382099 PPIDQ08752 370 aaKnown RBP16.02■□□□□ 0.16
VLDLR-202ENST00000382099 ALKBH5Q6P6C2 394 aaKnown RBP16.02■□□□□ 0.16
VLDLR-202ENST00000382099 DQX1Q8TE96 717 aaKnown RBP16.02■□□□□ 0.16
VLDLR-202ENST00000382099 TMEM60Q9H2L4 133 aa16.02■□□□□ 0.16
VLDLR-202ENST00000382099 SEMA6BQ9H3T3 888 aa16.02■□□□□ 0.16
VLDLR-202ENST00000382099 MYO5AQ9Y4I1 1855 aaKnown RBP16.02■□□□□ 0.15
VLDLR-202ENST00000382099 SMIM31A0A1B0GVY4 71 aa16.02■□□□□ 0.15
VLDLR-202ENST00000382099 CES2O00748 559 aa16.02■□□□□ 0.15
VLDLR-202ENST00000382099 GSC2O15499 205 aa16.02■□□□□ 0.15
VLDLR-202ENST00000382099 TXKP42681 527 aa16.02■□□□□ 0.15
VLDLR-202ENST00000382099 RBM26Q5T8P6 1007 aaKnown RBP16.02■□□□□ 0.15
VLDLR-202ENST00000382099 PATL1Q86TB9 770 aaKnown RBP16.02■□□□□ 0.15
VLDLR-202ENST00000382099 HELBQ8NG08 1087 aaPredicted RBP16.02■□□□□ 0.15
VLDLR-202ENST00000382099 TPCN2Q8NHX9 752 aa16.02■□□□□ 0.15
VLDLR-202ENST00000382099 SHISA4Q96DD7 197 aa16.02■□□□□ 0.15
VLDLR-202ENST00000382099 CLIP3Q96DZ5 547 aa16.02■□□□□ 0.15
VLDLR-202ENST00000382099 BTBD10Q9BSF8 475 aa16.02■□□□□ 0.15
VLDLR-202ENST00000382099 A0A0G2JND7 137 aa16.01■□□□□ 0.15
VLDLR-202ENST00000382099 KIAA0391O15091 583 aaKnown RBP16.01■□□□□ 0.15
VLDLR-202ENST00000382099 PHKG2P15735 406 aa16.01■□□□□ 0.15
VLDLR-202ENST00000382099 PGM1P36871 562 aa16.01■□□□□ 0.15
VLDLR-202ENST00000382099 NAALADL2Q58DX5 795 aa16.01■□□□□ 0.15
VLDLR-202ENST00000382099 C6orf163Q5TEZ5 329 aa16.01■□□□□ 0.15
VLDLR-202ENST00000382099 EPM2AIP1Q7L775 607 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms