RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 UBXN11Q5T124 520 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 NOTUMQ6P988 496 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 TMEM192Q8IY95 271 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 RNF169Q8NCN4 708 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 PRIMPOLQ96LW4 560 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 FIZ1Q96SL8 496 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 NTPCRQ9BSD7 190 aaKnown RBP17.79■□□□□ 0.44
SNRPB-201ENST00000381342 LRRC27Q9C0I9 530 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 USP25Q9UHP3 1055 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 PCDHB7Q9Y5E2 793 aa17.79■□□□□ 0.44
SNRPB-201ENST00000381342 FRMD3A2A2Y4 597 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 K7ERI5 159 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 ACKR2O00590 384 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 TRAK2O60296 914 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 MAPTP10636 758 aaKnown RBP17.78■□□□□ 0.44
SNRPB-201ENST00000381342 ATF7P17544 494 aaPredicted RBP17.78■□□□□ 0.44
SNRPB-201ENST00000381342 GAP43P17677 238 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 NMT1P30419 496 aaKnown RBP17.78■□□□□ 0.44
SNRPB-201ENST00000381342 GATMP50440 423 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 MRPS5P82675 430 aaKnown RBP17.78■□□□□ 0.44
SNRPB-201ENST00000381342 GPM6BQ13491 265 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 CUL4BQ13620 913 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 TJAP1Q5JTD0 557 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 ECHDC2Q86YB7 292 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 FAM178BQ8IXR5 827 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 FMR1NBQ8N0W7 255 aaPredicted RBP17.78■□□□□ 0.44
SNRPB-201ENST00000381342 CRIPAKQ8N1N5 446 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 PAGE5Q96GU1 130 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 C7orf25Q9BPX7 421 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 EIF2AQ9BY44 585 aaKnown RBP17.78■□□□□ 0.44
SNRPB-201ENST00000381342 PDZD7Q9H5P4 517 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 TMEM134Q9H6X4 195 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 FAM105AQ9NUU6 356 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 PANK4Q9NVE7 773 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 TBC1D7Q9P0N9 293 aa17.78■□□□□ 0.44
SNRPB-201ENST00000381342 COL4A4P53420 1690 aaPredicted RBP17.77■□□□□ 0.44
SNRPB-201ENST00000381342 A0A0U1RQF3 1178 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 ZNF202O95125 648 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 RB1P06400 928 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 FGFR1P11362 822 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 CTNNB1P35222 781 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 FAM160A1Q05DH4 1040 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 NCBP1Q09161 790 aaKnown RBP17.77■□□□□ 0.44
SNRPB-201ENST00000381342 COASYQ13057 564 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 NT5DC1Q5TFE4 455 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 CNNM4Q6P4Q7 775 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 KRBA2Q6ZNG9 492 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 HAUS6Q7Z4H7 955 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 SPRED2Q7Z698 418 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 CCDC65Q8IXS2 484 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 CNNM3Q8NE01 707 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 CCDC51Q96ER9 411 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 RC3H2Q9HBD1 1191 aaKnown RBP17.77■□□□□ 0.44
SNRPB-201ENST00000381342 PRDM6Q9NQX0 595 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 TMEM161AQ9NX61 479 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 SEL1LQ9UBV2 794 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 COG5Q9UP83 839 aa17.77■□□□□ 0.44
SNRPB-201ENST00000381342 RALGAPA2Q2PPJ7 1873 aa17.77■□□□□ 0.43
SNRPB-201ENST00000381342 H0YCG3 227 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 N4BP3O15049 544 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 LPXNO60711 386 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 DGKIO75912 1065 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 NPTXRO95502 500 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 PRR29P0C7W0 189 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 RAB27AP51159 221 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 FAM189BP81408 668 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 STRN3Q13033 797 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 PAN2Q504Q3 1202 aaKnown RBP17.76■□□□□ 0.43
SNRPB-201ENST00000381342 ZC2HC1CQ53FD0 456 aaPredicted RBP17.76■□□□□ 0.43
SNRPB-201ENST00000381342 HERC4Q5GLZ8 1057 aaPredicted RBP17.76■□□□□ 0.43
SNRPB-201ENST00000381342 ATF7IP2Q5U623 682 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 EEF1DP3Q658K8 133 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 SLC27A1Q6PCB7 646 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 ZNF598Q86UK7 904 aaKnown RBP17.76■□□□□ 0.43
SNRPB-201ENST00000381342 ENGASEQ8NFI3 743 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 LPPQ93052 612 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 HPS3Q969F9 1004 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 TRAIPQ9BWF2 469 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 MRPL4Q9BYD3 311 aaKnown RBP17.76■□□□□ 0.43
SNRPB-201ENST00000381342 FGFBP2Q9BYJ0 223 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 RNF19AQ9NV58 838 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 KCNG1Q9UIX4 513 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 PCDHB2Q9Y5E7 798 aa17.76■□□□□ 0.43
SNRPB-201ENST00000381342 A0A1B0GUA9 196 aa17.75■□□□□ 0.43
SNRPB-201ENST00000381342 MEIS3P2A8K0S8 358 aa17.75■□□□□ 0.43
SNRPB-201ENST00000381342 H3BNC9 293 aa17.75■□□□□ 0.43
SNRPB-201ENST00000381342 NR1I2O75469 434 aa17.75■□□□□ 0.43
SNRPB-201ENST00000381342 BMPR1AP36894 532 aa17.75■□□□□ 0.43
SNRPB-201ENST00000381342 CASP5P51878 434 aa17.75■□□□□ 0.43
SNRPB-201ENST00000381342 SNW1Q13573 536 aaKnown RBP17.75■□□□□ 0.43
SNRPB-201ENST00000381342 SPOUT1Q5T280 376 aaKnown RBP17.75■□□□□ 0.43
SNRPB-201ENST00000381342 CLEC17AQ6ZS10 378 aa17.75■□□□□ 0.43
SNRPB-201ENST00000381342 CMTR2Q8IYT2 770 aaKnown RBP17.75■□□□□ 0.43
SNRPB-201ENST00000381342 C11orf84Q9BUA3 381 aaPredicted RBP17.75■□□□□ 0.43
SNRPB-201ENST00000381342 TARS2Q9BW92 718 aaKnown RBP17.75■□□□□ 0.43
SNRPB-201ENST00000381342 COL25A1Q9BXS0 654 aaPredicted RBP17.75■□□□□ 0.43
SNRPB-201ENST00000381342 TRIM6Q9C030 488 aaPredicted RBP17.75■□□□□ 0.43
SNRPB-201ENST00000381342 NXF3Q9H4D5 531 aaKnown RBP17.75■□□□□ 0.43
SNRPB-201ENST00000381342 ELAC1Q9H777 363 aaKnown RBP17.75■□□□□ 0.43
SNRPB-201ENST00000381342 MRPL44Q9H9J2 332 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms