RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 USP28Q96RU2 1077 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 LLPHQ9BRT6 129 aaKnown RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 YIPF4Q9BSR8 244 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 EPB41L1Q9H4G0 881 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 NGRNQ9NPE2 291 aaKnown RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 GPR108Q9NPR9 543 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 RCOR1Q9UKL0 485 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 ZNF652Q9Y2D9 606 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 MSRB2Q9Y3D2 182 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 TNS3Q68CZ2 1445 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 UBR2Q8IWV8 1755 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 ERVV-2B6SEH9 535 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 FOXP2O15409 715 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 PDPK1O15530 556 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 C8BP07358 591 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 FDPSP14324 419 aaKnown RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 GTF2F1P35269 517 aaKnown RBP eCLIP4.28□□□□□ -1.72
SMC6-202ENST00000381272 ME1P48163 572 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 SLURP1P55000 103 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 HMGN5P82970 282 aaKnown RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 IQCB1Q15051 598 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 CCDC57Q2TAC2 916 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 CCDC144BQ3MJ40 725 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 TAF7LQ5H9L4 462 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 CCDC158Q5M9N0 1113 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 NAA16Q6N069 864 aaPredicted RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 LIPIQ6XZB0 460 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 KCPQ6ZWJ8 1503 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 FAM126BQ8IXS8 530 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 ZDHHC14Q8IZN3 488 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 ADGRG2Q8IZP9 1017 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 FSIP1Q8NA03 581 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 CCDC191Q8NCU4 936 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 TDRD7Q8NHU6 1098 aaKnown RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 FEZF2Q8TBJ5 459 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 ZNF396Q96N95 335 aaPredicted RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 NOX5Q96PH1 765 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 PHF20Q9BVI0 1012 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 AGXT2Q9BYV1 514 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 PCDH11XQ9BZA7 1347 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 PCDH11YQ9BZA8 1340 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 PUS7LQ9H0K6 701 aaKnown RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 PRDM11Q9NQV5 511 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 GJB4Q9NTQ9 266 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 NTMQ9P121 344 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 CLIP2Q9UDT6 1046 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 PARP4Q9UKK3 1724 aaKnown RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 MYO5AQ9Y4I1 1855 aaKnown RBP4.28□□□□□ -1.72
SMC6-202ENST00000381272 CLIC4Q9Y696 253 aa4.28□□□□□ -1.72
SMC6-202ENST00000381272 ABCC6O95255 1503 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 CARMIL3Q8ND23 1372 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 WDR17Q8IZU2 1322 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 A0A0G2JLL6 359 aaPredicted RBP4.27□□□□□ -1.73
SMC6-202ENST00000381272 KLF18A0A0U1RQI7 1052 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 A0A1B0GTL3 188 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 A0A1B0GVL5 298 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 CCDC85CA6NKD9 419 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 GOLGA6L19H0YKK7 550 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 PRC1O43663 620 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 MAFKO60675 156 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 CIAO1O76071 339 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 FGAP02671 866 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 GPTP24298 496 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 DLX2Q07687 328 aaPredicted RBP4.27□□□□□ -1.73
SMC6-202ENST00000381272 IFRD2Q12894 506 aaPredicted RBP4.27□□□□□ -1.73
SMC6-202ENST00000381272 TCIRG1Q13488 830 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 RASGRF1Q13972 1273 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 NFIXQ14938 502 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 STX1AQ16623 288 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 MTERF2Q49AM1 385 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 EMC4Q5J8M3 183 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 ZSCAN25Q6NSZ9 544 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 CCDC73Q6ZRK6 1079 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 DPH6Q7L8W6 267 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 DNAJC10Q8IXB1 793 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 LINC00482Q8N8I6 264 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 ENGASEQ8NFI3 743 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.27□□□□□ -1.73
SMC6-202ENST00000381272 CACTINQ8WUQ7 758 aaKnown RBP4.27□□□□□ -1.73
SMC6-202ENST00000381272 RELTQ969Z4 430 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 ARMC5Q96C12 935 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 ZNF274Q96GC6 653 aaPredicted RBP4.27□□□□□ -1.73
SMC6-202ENST00000381272 MAP7D2Q96T17 732 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 ZFYVE21Q9BQ24 234 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 GORASP1Q9BQQ3 440 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 ISCA1Q9BUE6 129 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 SPATA9Q9BWV2 254 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 CCDC113Q9H0I3 377 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 SIRPGQ9P1W8 387 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 DENND2AQ9ULE3 1009 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 ASAP1Q9ULH1 1129 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 PCDHA7Q9UN72 937 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 PCDHB4Q9Y5E5 795 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 MYH7P12883 1935 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 SHANK3Q9BYB0 1731 aa4.27□□□□□ -1.73
SMC6-202ENST00000381272 KAT6BQ8WYB5 2073 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 CPDO75976 1380 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 SALL1Q9NSC2 1324 aa4.26□□□□□ -1.73
SMC6-202ENST00000381272 GOLGA8BA8MQT2 603 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms