RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 GCLMP48507 274 aa11.91□□□□□ -0.5
FAM239A-201ENST00000381108 SNRPFP62306 86 aaKnown RBP11.91□□□□□ -0.5
FAM239A-201ENST00000381108 ARID5AQ03989 594 aa11.91□□□□□ -0.5
FAM239A-201ENST00000381108 NOGQ13253 232 aa11.91□□□□□ -0.5
FAM239A-201ENST00000381108 RAPGEF1Q13905 1077 aa11.91□□□□□ -0.5
FAM239A-201ENST00000381108 ENOX2Q16206 610 aaKnown RBP11.91□□□□□ -0.5
FAM239A-201ENST00000381108 MEA1Q16626 185 aa11.91□□□□□ -0.5
FAM239A-201ENST00000381108 GJB7Q6PEY0 223 aa11.91□□□□□ -0.5
FAM239A-201ENST00000381108 REXO1L1PQ8IX06 675 aa11.91□□□□□ -0.5
FAM239A-201ENST00000381108 CAPNS2Q96L46 248 aa11.91□□□□□ -0.5
FAM239A-201ENST00000381108 NHEJ1Q9H9Q4 299 aaPredicted RBP11.91□□□□□ -0.5
FAM239A-201ENST00000381108 LZTFL1Q9NQ48 299 aa11.91□□□□□ -0.5
FAM239A-201ENST00000381108 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.91□□□□□ -0.5
FAM239A-201ENST00000381108 KCNG1Q9UIX4 513 aa11.91□□□□□ -0.5
FAM239A-201ENST00000381108 PLAGL2Q9UPG8 496 aa11.91□□□□□ -0.5
FAM239A-201ENST00000381108 FHOD1Q9Y613 1164 aa11.91□□□□□ -0.5
FAM239A-201ENST00000381108 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
FAM239A-201ENST00000381108 TBC1D8O95759 1140 aa11.9□□□□□ -0.5
FAM239A-201ENST00000381108 UCHL3P15374 230 aa11.9□□□□□ -0.5
FAM239A-201ENST00000381108 FCGRTP55899 365 aa11.9□□□□□ -0.5
FAM239A-201ENST00000381108 PPP3CAQ08209 521 aa11.9□□□□□ -0.5
FAM239A-201ENST00000381108 MXD4Q14582 209 aaPredicted RBP11.9□□□□□ -0.5
FAM239A-201ENST00000381108 DEFB115Q30KQ5 88 aa11.9□□□□□ -0.5
FAM239A-201ENST00000381108 PDXDC1Q6P996 788 aa11.9□□□□□ -0.5
FAM239A-201ENST00000381108 TRIM65Q6PJ69 517 aa11.9□□□□□ -0.5
FAM239A-201ENST00000381108 EXOC8Q8IYI6 725 aa11.9□□□□□ -0.5
FAM239A-201ENST00000381108 POP1Q99575 1024 aaKnown RBP11.9□□□□□ -0.5
FAM239A-201ENST00000381108 JPH2Q9BR39 696 aaPredicted RBP11.9□□□□□ -0.5
FAM239A-201ENST00000381108 GABRQQ9UN88 632 aa11.9□□□□□ -0.5
FAM239A-201ENST00000381108 GNEQ9Y223 722 aaKnown RBP11.9□□□□□ -0.5
FAM239A-201ENST00000381108 AKT3Q9Y243 479 aa11.9□□□□□ -0.5
FAM239A-201ENST00000381108 KAT6AQ92794 2004 aa11.9□□□□□ -0.51
FAM239A-201ENST00000381108 NDUFA10O95299 355 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 DLATP10515 647 aaKnown RBP11.89□□□□□ -0.51
FAM239A-201ENST00000381108 ABCD1P33897 745 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 ACOT2P49753 483 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 LACTBP83111 547 aaPredicted RBP11.89□□□□□ -0.51
FAM239A-201ENST00000381108 BEX3Q00994 111 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 PPFIA1Q13136 1202 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 TDRD12Q587J7 1177 aaKnown RBP11.89□□□□□ -0.51
FAM239A-201ENST00000381108 ZNF484Q5JVG2 852 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 KLHDC7AQ5VTJ3 777 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 ZBTB8OSQ8IWT0 167 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 GPD1LQ8N335 351 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 TMEM174Q8WUU8 243 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 FAM84AQ96KN4 292 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 SPAG5Q96R06 1193 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 HAPLN2Q9GZV7 340 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 AJAP1Q9UKB5 411 aaPredicted RBP11.89□□□□□ -0.51
FAM239A-201ENST00000381108 GTPBP10A4D1E9 387 aaKnown RBP11.89□□□□□ -0.51
FAM239A-201ENST00000381108 INO80B-WBP1J3KQ70 363 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 CSDE1O75534 798 aaKnown RBP11.89□□□□□ -0.51
FAM239A-201ENST00000381108 SLU7O95391 586 aaKnown RBP11.89□□□□□ -0.51
FAM239A-201ENST00000381108 ALDH1A1P00352 501 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 VTNP04004 478 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 PNMA6AP0CW24 399 aaPredicted RBP11.89□□□□□ -0.51
FAM239A-201ENST00000381108 GARTP22102 1010 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 GRIK4Q16099 956 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 SEZ6Q53EL9 994 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 C1orf220Q5T0J3 134 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 DPY19L2P1Q6NXN4 242 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 INO80BQ9C086 356 aaPredicted RBP11.89□□□□□ -0.51
FAM239A-201ENST00000381108 DEF6Q9H4E7 631 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 L2HGDHQ9H9P8 463 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 SIX2Q9NPC8 291 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 PLCB1Q9NQ66 1216 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 TOPORSQ9NS56 1045 aaPredicted RBP11.89□□□□□ -0.51
FAM239A-201ENST00000381108 ARHGAP20Q9P2F6 1191 aa11.89□□□□□ -0.51
FAM239A-201ENST00000381108 EPN1Q9Y6I3 576 aaPredicted RBP11.89□□□□□ -0.51
FAM239A-201ENST00000381108 LRRN2O75325 713 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 PRKCBP05771 671 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 FLT3LGP49771 235 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 NLRP11P59045 1033 aaKnown RBP11.88□□□□□ -0.51
FAM239A-201ENST00000381108 CAP1Q01518 475 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 PRKCZQ05513 592 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 NCBP1Q09161 790 aaKnown RBP11.88□□□□□ -0.51
FAM239A-201ENST00000381108 MAPK6Q16659 721 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 ZBTB41Q5SVQ8 909 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 SFMBT2Q5VUG0 894 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 CDCA2Q69YH5 1023 aaPredicted RBP11.88□□□□□ -0.51
FAM239A-201ENST00000381108 ZBTB33Q86T24 672 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 TRIB2Q92519 343 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 CCDC42Q96M95 316 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 TCHPQ9BT92 498 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 MSTO1Q9BUK6 570 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 INTS2Q9H0H0 1204 aaKnown RBP11.88□□□□□ -0.51
FAM239A-201ENST00000381108 TMEM134Q9H6X4 195 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 SETD4Q9NVD3 440 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 AGO2Q9UKV8 859 aaKnown RBP11.88□□□□□ -0.51
FAM239A-201ENST00000381108 TFR2Q9UP52 801 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 A6NJR5 290 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 LRRIQ3A6PVS8 624 aaPredicted RBP11.88□□□□□ -0.51
FAM239A-201ENST00000381108 MSCO60682 206 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 HOXD8P13378 290 aaPredicted RBP11.88□□□□□ -0.51
FAM239A-201ENST00000381108 HNRNPH3P31942 346 aaKnown RBP11.88□□□□□ -0.51
FAM239A-201ENST00000381108 CYLC1P35663 651 aaPredicted RBP11.88□□□□□ -0.51
FAM239A-201ENST00000381108 MXI1P50539 228 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 EFNA5P52803 228 aa11.88□□□□□ -0.51
FAM239A-201ENST00000381108 ETF1P62495 437 aaKnown RBP11.88□□□□□ -0.51
FAM239A-201ENST00000381108 CYP27A1Q02318 531 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms