RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 CDKL5O76039 1030 aa17.84■□□□□ 0.45
VCX3A-201ENST00000381089 HOXA11P31270 313 aaPredicted RBP17.84■□□□□ 0.45
VCX3A-201ENST00000381089 YWHABP31946 246 aaKnown RBP17.84■□□□□ 0.45
VCX3A-201ENST00000381089 GBP2P32456 591 aaPredicted RBP17.84■□□□□ 0.45
VCX3A-201ENST00000381089 EMC2Q15006 297 aa17.84■□□□□ 0.45
VCX3A-201ENST00000381089 PPP4R3AQ6IN85 833 aa17.84■□□□□ 0.45
VCX3A-201ENST00000381089 NOTUMQ6P988 496 aa17.84■□□□□ 0.45
VCX3A-201ENST00000381089 NEK8Q86SG6 692 aa17.84■□□□□ 0.45
VCX3A-201ENST00000381089 C4orf19Q8IY42 314 aa17.84■□□□□ 0.45
VCX3A-201ENST00000381089 MTRQ99707 1265 aa17.84■□□□□ 0.45
VCX3A-201ENST00000381089 LXNQ9BS40 222 aa17.84■□□□□ 0.45
VCX3A-201ENST00000381089 RHOBTB2Q9BYZ6 727 aa17.84■□□□□ 0.45
VCX3A-201ENST00000381089 KCNMB3Q9NPA1 279 aa17.84■□□□□ 0.45
VCX3A-201ENST00000381089 VAV3Q9UKW4 847 aa17.84■□□□□ 0.45
VCX3A-201ENST00000381089 CCDC195A0A1B0GUA6 201 aa17.83■□□□□ 0.44
VCX3A-201ENST00000381089 TBX3O15119 743 aa17.83■□□□□ 0.44
VCX3A-201ENST00000381089 TOB2Q14106 344 aaPredicted RBP17.83■□□□□ 0.44
VCX3A-201ENST00000381089 TFDP1Q14186 410 aa17.83■□□□□ 0.44
VCX3A-201ENST00000381089 MXD4Q14582 209 aaPredicted RBP17.83■□□□□ 0.44
VCX3A-201ENST00000381089 EPHA7Q15375 998 aa17.83■□□□□ 0.44
VCX3A-201ENST00000381089 XKR9Q5GH70 373 aa17.83■□□□□ 0.44
VCX3A-201ENST00000381089 UBXN11Q5T124 520 aa17.83■□□□□ 0.44
VCX3A-201ENST00000381089 FERMT3Q86UX7 667 aa17.83■□□□□ 0.44
VCX3A-201ENST00000381089 HDAC7Q8WUI4 952 aa17.83■□□□□ 0.44
VCX3A-201ENST00000381089 NXPE3Q969Y0 559 aa17.83■□□□□ 0.44
VCX3A-201ENST00000381089 TRIM6Q9C030 488 aaPredicted RBP17.83■□□□□ 0.44
VCX3A-201ENST00000381089 ZSWIM4Q9H7M6 989 aa17.83■□□□□ 0.44
VCX3A-201ENST00000381089 MINDY3Q9H8M7 445 aa17.83■□□□□ 0.44
VCX3A-201ENST00000381089 ZSWIM6Q9HCJ5 1215 aa17.83■□□□□ 0.44
VCX3A-201ENST00000381089 WDR6Q9NNW5 1121 aaKnown RBP17.83■□□□□ 0.44
VCX3A-201ENST00000381089 BMP2KQ9NSY1 1161 aaPredicted RBP17.83■□□□□ 0.44
VCX3A-201ENST00000381089 WNT16Q9UBV4 365 aa17.83■□□□□ 0.44
VCX3A-201ENST00000381089 C2orf16Q68DN1 1984 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 VPS13AQ96RL7 3174 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 CLUHO75153 1309 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 INPPL1O15357 1258 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 TEX28O15482 410 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 EPB41L2O43491 1005 aaKnown RBP17.82■□□□□ 0.44
VCX3A-201ENST00000381089 CCNT1O60563 726 aaKnown RBP17.82■□□□□ 0.44
VCX3A-201ENST00000381089 BAG4O95429 457 aaKnown RBP17.82■□□□□ 0.44
VCX3A-201ENST00000381089 NPR3P17342 541 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 AFF1P51825 1210 aaKnown RBP17.82■□□□□ 0.44
VCX3A-201ENST00000381089 STK3Q13188 491 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 ANGPT1Q15389 498 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 NCAPH2Q6IBW4 605 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 COLGALT2Q8IYK4 626 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 DTWD2Q8NBA8 298 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 SMG7Q92540 1137 aaKnown RBP17.82■□□□□ 0.44
VCX3A-201ENST00000381089 COLEC11Q9BWP8 271 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 PIDD1Q9HB75 910 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.82■□□□□ 0.44
VCX3A-201ENST00000381089 MARCH5Q9NX47 278 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 IPPQ9Y573 584 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 GTF3C3Q9Y5Q9 886 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 SPTBN4Q9H254 2564 aa17.82■□□□□ 0.44
VCX3A-201ENST00000381089 ARL5CA6NH57 179 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 C1RP00736 705 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 MLH1P40692 756 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 DSG1Q02413 1049 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 CREMQ03060 361 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 NPY5RQ15761 445 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 SLFN12Q8IYM2 578 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 ADSSL1Q8N142 457 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 ZNF579Q8NAF0 562 aaKnown RBP17.81■□□□□ 0.44
VCX3A-201ENST00000381089 SMG8Q8ND04 991 aaKnown RBP17.81■□□□□ 0.44
VCX3A-201ENST00000381089 CCDC43Q96MW1 224 aaKnown RBP17.81■□□□□ 0.44
VCX3A-201ENST00000381089 AIFM3Q96NN9 605 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 GAD1Q99259 594 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 CSRNP2Q9H175 543 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 PLEKHA4Q9H4M7 779 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 RXFP1Q9HBX9 757 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 EPS15L1Q9UBC2 864 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 KCNJ14Q9UNX9 436 aa17.81■□□□□ 0.44
VCX3A-201ENST00000381089 INO80B-WBP1J3KQ70 363 aa17.8■□□□□ 0.44
VCX3A-201ENST00000381089 PI15O43692 258 aa17.8■□□□□ 0.44
VCX3A-201ENST00000381089 TSPAN1O60635 241 aa17.8■□□□□ 0.44
VCX3A-201ENST00000381089 CFHP08603 1231 aa17.8■□□□□ 0.44
VCX3A-201ENST00000381089 PTENP60484 403 aa17.8■□□□□ 0.44
VCX3A-201ENST00000381089 KIAA0319Q5VV43 1072 aa17.8■□□□□ 0.44
VCX3A-201ENST00000381089 ERMP1Q7Z2K6 904 aa17.8■□□□□ 0.44
VCX3A-201ENST00000381089 FEZF2Q8TBJ5 459 aa17.8■□□□□ 0.44
VCX3A-201ENST00000381089 PHF20Q9BVI0 1012 aa17.8■□□□□ 0.44
VCX3A-201ENST00000381089 SEMA4AQ9H3S1 761 aa17.8■□□□□ 0.44
VCX3A-201ENST00000381089 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.8■□□□□ 0.44
VCX3A-201ENST00000381089 WRAP73Q9P2S5 460 aaPredicted RBP17.8■□□□□ 0.44
VCX3A-201ENST00000381089 GIT1Q9Y2X7 761 aa17.8■□□□□ 0.44
VCX3A-201ENST00000381089 DMDP11532 3685 aa17.79■□□□□ 0.44
VCX3A-201ENST00000381089 SRFP11831 508 aa17.79■□□□□ 0.44
VCX3A-201ENST00000381089 SCNN1GP51170 649 aa17.79■□□□□ 0.44
VCX3A-201ENST00000381089 POU5F1BQ06416 359 aa17.79■□□□□ 0.44
VCX3A-201ENST00000381089 DSC1Q08554 894 aa17.79■□□□□ 0.44
VCX3A-201ENST00000381089 USP41Q3LFD5 358 aa17.79■□□□□ 0.44
VCX3A-201ENST00000381089 PIK3AP1Q6ZUJ8 805 aa17.79■□□□□ 0.44
VCX3A-201ENST00000381089 TAS1R1Q7RTX1 841 aa17.79■□□□□ 0.44
VCX3A-201ENST00000381089 TPH2Q8IWU9 490 aa17.79■□□□□ 0.44
VCX3A-201ENST00000381089 GPR65Q8IYL9 337 aa17.79■□□□□ 0.44
VCX3A-201ENST00000381089 RNF168Q8IYW5 571 aaPredicted RBP17.79■□□□□ 0.44
VCX3A-201ENST00000381089 KCNG4Q8TDN1 519 aa17.79■□□□□ 0.44
VCX3A-201ENST00000381089 DYDC2Q96IM9 177 aa17.79■□□□□ 0.44
VCX3A-201ENST00000381089 APOL6Q9BWW8 343 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms