RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 CALR3Q96L12 384 aaKnown RBP13.11□□□□□ -0.31
GABPB1-203ENST00000380877 SEMA6BQ9H3T3 888 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 CYP26B1Q9NR63 512 aa13.11□□□□□ -0.31
GABPB1-203ENST00000380877 VWA5AO00534 786 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 FOXP2O15409 715 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 C6orf222P0C671 652 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-203ENST00000380877 ANXA13P27216 316 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 DSG3P32926 999 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 ARPP19P56211 112 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 SNRPFP62306 86 aaKnown RBP13.1□□□□□ -0.31
GABPB1-203ENST00000380877 PSMC6P62333 389 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 CCDC110Q8TBZ0 833 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 ATP2A3Q93084 1043 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 ACAP3Q96P50 834 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 PNMA5Q96PV4 448 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 AP5Z1O43299 807 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 SARSP49591 514 aaKnown RBP13.1□□□□□ -0.31
GABPB1-203ENST00000380877 CDKAL1Q5VV42 579 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 DARS2Q6PI48 645 aaKnown RBP13.1□□□□□ -0.31
GABPB1-203ENST00000380877 TBC1D31Q96DN5 1066 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 NUDT12Q9BQG2 462 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 HEMGNQ9BXL5 484 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 CAPS2Q9BXY5 557 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 M0QYV0 167 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 ASAP2O43150 1006 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 PGK2P07205 417 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 BASP1P80723 227 aaKnown RBP13.1□□□□□ -0.31
GABPB1-203ENST00000380877 CUL1Q13616 776 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 NCOA4Q13772 614 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 TTC39CQ8N584 583 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 RBM41Q96IZ5 413 aaKnown RBP13.1□□□□□ -0.31
GABPB1-203ENST00000380877 TBX20Q9UMR3 447 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 POC1B-GALNT4F8VUJ3 575 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 NPM3O75607 178 aaKnown RBP13.1□□□□□ -0.31
GABPB1-203ENST00000380877 HOXD10P28358 340 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 GALCP54803 685 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 PSMC1P62191 440 aaKnown RBP13.1□□□□□ -0.31
GABPB1-203ENST00000380877 KYAT1Q16773 422 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 KLHDC7AQ5VTJ3 777 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 TRIM10Q9UDY6 481 aa13.1□□□□□ -0.31
GABPB1-203ENST00000380877 LAMC2Q13753 1193 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 NT5DC1Q5TFE4 455 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 CCHCR1Q8TD31 782 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 SCFD1Q8WVM8 642 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 PLAGL2Q9UPG8 496 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 PIN4Q9Y237 131 aaKnown RBP13.09□□□□□ -0.31
GABPB1-203ENST00000380877 RNF40O75150 1001 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 PNMA6AP0CW24 399 aaPredicted RBP13.09□□□□□ -0.31
GABPB1-203ENST00000380877 GTF2A2P52657 109 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 SLC12A2P55011 1212 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 GABPAQ06546 454 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 ITKQ08881 620 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 PPP6R3Q5H9R7 873 aaPredicted RBP13.09□□□□□ -0.31
GABPB1-203ENST00000380877 EFCAB12Q6NXP0 572 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 AGO4Q9HCK5 861 aaKnown RBP13.09□□□□□ -0.31
GABPB1-203ENST00000380877 ATP8B3O60423 1300 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 TJP3O95049 919 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 SUPT20HL2P0C7V6 817 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 HSPH1Q92598 858 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 SPATC1LQ9H0A9 340 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 DDX47Q9H0S4 455 aaKnown RBP13.09□□□□□ -0.31
GABPB1-203ENST00000380877 MROH8Q9H579 483 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 TMEM8AQ9HCN3 771 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 SNX12Q9UMY4 172 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 FAN1Q9Y2M0 1017 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 SNX24Q9Y343 169 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 PHLPP1O60346 1717 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 PODXLO00592 558 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 MNAT1P51948 309 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 FUT2Q10981 343 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 SLMAPQ14BN4 828 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 EPC1Q9H2F5 836 aa13.09□□□□□ -0.31
GABPB1-203ENST00000380877 MKRN1Q9UHC7 482 aaKnown RBP13.09□□□□□ -0.31
GABPB1-203ENST00000380877 I3L4J1 428 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 RTN2O75298 545 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 CASP4P49662 377 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 PGM5Q15124 567 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 GEN1Q17RS7 908 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.08□□□□□ -0.32
GABPB1-203ENST00000380877 ZFYVE28Q9HCC9 887 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 KCPQ6ZWJ8 1503 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 P4HA2O15460 535 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 HLA-DRAP01903 254 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 MYBL1P10243 752 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 CDC42EP1Q00587 391 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 VSIG1Q86XK7 387 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 C4orf19Q8IY42 314 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 KIAA0895Q8NCT3 520 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 BCAS4Q8TDM0 211 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 RNF25Q96BH1 459 aaPredicted RBP13.08□□□□□ -0.32
GABPB1-203ENST00000380877 AGAP1Q9UPQ3 857 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 ADM5C9JUS6 153 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 HERVK_113P62684 666 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 ATF7IP2Q5U623 682 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 BLOC1S4Q9NUP1 217 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 PRMT7Q9NVM4 692 aaPredicted RBP13.08□□□□□ -0.32
GABPB1-203ENST00000380877 FAM237AA0A1B0GTK4 181 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 A8MXQ7 604 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 SCP2P22307 547 aa13.08□□□□□ -0.32
GABPB1-203ENST00000380877 SSTR3P32745 418 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms