RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CHN1P15882 459 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 TNFAIP3P21580 790 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 USP8P40818 1118 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 SMTNP53814 917 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 TLCD1Q96CP7 247 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 NACC1Q96RE7 527 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 GPRC5CQ9NQ84 441 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 FEM1BQ9UK73 627 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 K7ENM7 598 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 PIK3CDO00329 1044 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 FGFR4P22455 802 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 MYL7Q01449 175 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 SLC29A2Q14542 456 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 TTC27Q6P3X3 843 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 ZSWIM2Q8NEG5 633 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 ZKSCAN4Q969J2 545 aaPredicted RBP17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 SEMA4AQ9H3S1 761 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 AZI2Q9H6S1 392 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 APEX2Q9UBZ4 518 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 ALG6Q9Y672 507 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 FRMPD4Q14CM0 1322 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 GOLGA8IPA6NC78 632 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 GOLGA8JA6NMD2 632 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 PAEPP09466 180 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 VCAM1P19320 739 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 FAM160B2Q86V87 743 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 SLC5A5Q92911 643 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 XPO6Q96QU8 1125 aaKnown RBP17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 RAB17Q9H0T7 212 aa17.53■□□□□ 0.4
NKX3-1-201ENST00000380871 ANKRD63C9JTQ0 380 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 KIAA0391O15091 583 aaKnown RBP17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 ANXA13P27216 316 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 PMS2P54278 862 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 NBPF12Q5TAG4 269 aaPredicted RBP17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 PADI6Q6TGC4 694 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 KAT5Q92993 513 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 WNK4Q96J92 1243 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 BTBD6Q96KE9 485 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 NCAPGQ9BPX3 1015 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 MXRA8Q9BRK3 442 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 CARD9Q9H257 536 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 ADAM7Q9H2U9 754 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 PIM2Q9P1W9 311 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 RGS17Q9UGC6 210 aaPredicted RBP17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 TTC7AQ9ULT0 858 aaPredicted RBP17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 PTPN22Q9Y2R2 807 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 RPTORQ8N122 1335 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 SRRM3A6NNA2 597 aaPredicted RBP17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 RPL21P46778 160 aaKnown RBP17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 SCTRP47872 440 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 ARHGEF19Q8IW93 802 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 EPS8L3Q8TE67 593 aaKnown RBP17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 GRHL1Q9NZI5 618 aa17.52■□□□□ 0.4
NKX3-1-201ENST00000380871 C5orf60A6NFR6 353 aa17.52■□□□□ 0.39
NKX3-1-201ENST00000380871 SLC26A4O43511 780 aa17.52■□□□□ 0.39
NKX3-1-201ENST00000380871 PPP1R12BO60237 982 aaPredicted RBP17.52■□□□□ 0.39
NKX3-1-201ENST00000380871 MAPK7Q13164 816 aa17.52■□□□□ 0.39
NKX3-1-201ENST00000380871 CCDC38Q502W7 563 aa17.52■□□□□ 0.39
NKX3-1-201ENST00000380871 GKAP1Q5VSY0 366 aaPredicted RBP17.52■□□□□ 0.39
NKX3-1-201ENST00000380871 PLA2G4FQ68DD2 849 aa17.52■□□□□ 0.39
NKX3-1-201ENST00000380871 ZNF720Q7Z2F6 126 aa17.52■□□□□ 0.39
NKX3-1-201ENST00000380871 PRELID2Q8N945 189 aa17.52■□□□□ 0.39
NKX3-1-201ENST00000380871 CTTNBP2NLQ9P2B4 639 aa17.52■□□□□ 0.39
NKX3-1-201ENST00000380871 GGA2Q9UJY4 613 aa17.52■□□□□ 0.39
NKX3-1-201ENST00000380871 COL4A5P29400 1685 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 MMEP08473 750 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 RPS6P62753 249 aaKnown RBP17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 TRAF1Q13077 416 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 ERMARDQ5T6L9 678 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 NEK9Q8TD19 979 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 TAOK3Q9H2K8 898 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 YY1AP1Q9H869 796 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 TUFT1Q9NNX1 390 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 FRMD4BQ9Y2L6 1034 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 FTLP02792 175 aaPredicted RBP17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 BAG6P46379 1132 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 IFNAR2P48551 515 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 SOX10P56693 466 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 CYB5D1Q6P9G0 228 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 FAM228AQ86W67 206 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 CHMP6Q96FZ7 201 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 PABPC3Q9H361 631 aaKnown RBP17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 C10orf71Q711Q0 1435 aa17.51■□□□□ 0.39
NKX3-1-201ENST00000380871 QSER1Q2KHR3 1735 aa17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 GOLGA6L10A0A0M3HER8 536 aa17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 ATP9AO75110 1047 aa17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 GAP43P17677 238 aa17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 MICALL2Q8IY33 904 aa17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 FUKQ8N0W3 1084 aa17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 KIFC3Q9BVG8 833 aa17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 UBE2TQ9NPD8 197 aaPredicted RBP17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 EIF3DO15371 548 aaKnown RBP eCLIP17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 PTGIRP43119 386 aa17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 KCNJ1P48048 391 aa17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 SETQ01105 290 aaPredicted RBP17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 PDE4CQ08493 712 aa17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 MESDQ14696 234 aa17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 TNIP1Q15025 636 aa17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 DENND2CQ68D51 928 aa17.5■□□□□ 0.39
NKX3-1-201ENST00000380871 CCDC91Q7Z6B0 441 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms