RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 SPTLC2O15270 562 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 PLA2G4BP0C869 781 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 CD46P15529 392 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 PLCG1P19174 1290 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 TXLNAP40222 546 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 GATMP50440 423 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 FAM189BP81408 668 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 BTG3Q14201 252 aaPredicted RBP10.21□□□□□ -0.77
HMGN1-202ENST00000380747 DHX8Q14562 1220 aaKnown RBP10.21□□□□□ -0.77
HMGN1-202ENST00000380747 RINT1Q6NUQ1 792 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 USP49Q70CQ1 688 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 ECHDC2Q86YB7 292 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 ZBTB8OSQ8IWT0 167 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 FAM178BQ8IXR5 827 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 FIBCD1Q8N539 461 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 KCTD17Q8N5Z5 321 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 LINC00301Q8NCQ3 95 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 DEPTORQ8TB45 409 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 BSNDQ8WZ55 320 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 KIFAP3Q92845 792 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 EPSTI1Q96J88 318 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 IFT74Q96LB3 600 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 TGS1Q96RS0 853 aaKnown RBP10.21□□□□□ -0.77
HMGN1-202ENST00000380747 KCNH6Q9H252 994 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 CD320Q9NPF0 282 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 CHST12Q9NRB3 414 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 AGPAT5Q9NUQ2 364 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 TMEM161AQ9NX61 479 aa10.21□□□□□ -0.77
HMGN1-202ENST00000380747 ADGRA3Q8IWK6 1321 aa10.21□□□□□ -0.78
HMGN1-202ENST00000380747 PTPRSQ13332 1948 aa10.21□□□□□ -0.78
HMGN1-202ENST00000380747 TSPAN1O60635 241 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 HIP1RO75146 1068 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 YEATS4O95619 227 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 BRD1O95696 1058 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 KRT18P05783 430 aaKnown RBP10.2□□□□□ -0.78
HMGN1-202ENST00000380747 FGFR1P11362 822 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 NAMPTP43490 491 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 ERVK-21P61565 698 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 DNM1Q05193 864 aaKnown RBP10.2□□□□□ -0.78
HMGN1-202ENST00000380747 MBTD1Q05BQ5 628 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 POU5F1BQ06416 359 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 NCBP1Q09161 790 aaKnown RBP10.2□□□□□ -0.78
HMGN1-202ENST00000380747 RAD51AP2Q09MP3 1159 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 PPP2R5AQ15172 486 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 LEXMQ3ZCV2 418 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 LONRF3Q496Y0 759 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 SPOUT1Q5T280 376 aaKnown RBP10.2□□□□□ -0.78
HMGN1-202ENST00000380747 C1orf186Q6ZWK4 172 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 CMTR2Q8IYT2 770 aaKnown RBP10.2□□□□□ -0.78
HMGN1-202ENST00000380747 ABI1Q8IZP0 508 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 GJD3Q8N144 294 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 SYT2Q8N9I0 419 aaPredicted RBP10.2□□□□□ -0.78
HMGN1-202ENST00000380747 RAD54LQ92698 747 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 CPB2Q96IY4 423 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 C17orf80Q9BSJ5 609 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 CCSER1Q9C0I3 900 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 C2orf40Q9H1Z8 148 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 ELAC1Q9H777 363 aaKnown RBP10.2□□□□□ -0.78
HMGN1-202ENST00000380747 UBE2ZQ9H832 354 aaPredicted RBP10.2□□□□□ -0.78
HMGN1-202ENST00000380747 CCDC39Q9UFE4 941 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 CFAP45Q9UL16 551 aa10.2□□□□□ -0.78
HMGN1-202ENST00000380747 MORC2Q9Y6X9 1032 aaPredicted RBP10.2□□□□□ -0.78
HMGN1-202ENST00000380747 NPHP3-ACAD11A0A0J9YXS1 232 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 A0A0U1RQF3 1178 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 FAM86C2PA6NEL3 165 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 CCDC169A6NNP5 214 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 TBKBP1A7MCY6 615 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 SFI1A8K8P3 1242 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 PPP6R2O75170 966 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 SKIP12755 728 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 ALADP13716 330 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 NCLP19338 710 aaKnown RBP10.19□□□□□ -0.78
HMGN1-202ENST00000380747 GUCY2CP25092 1073 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 CTNNB1P35222 781 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 SLC12A3P55017 1021 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 PEX3P56589 373 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 MCM6Q14566 821 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 RRAGBQ5VZM2 374 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 ATL3Q6DD88 541 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 GPBP1Q86WP2 473 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 DAW1Q8N136 415 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 CRIPAKQ8N1N5 446 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 ZNF689Q96CS4 500 aaPredicted RBP10.19□□□□□ -0.78
HMGN1-202ENST00000380747 DRC1Q96MC2 740 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 SAMD11Q96NU1 681 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 KIFC3Q9BVG8 833 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 TIPINQ9BVW5 301 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 NFKBIZQ9BYH8 718 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 PANK2Q9BZ23 570 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 RC3H2Q9HBD1 1191 aaKnown RBP10.19□□□□□ -0.78
HMGN1-202ENST00000380747 BLOC1S4Q9NUP1 217 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 FAM105AQ9NUU6 356 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 ZDHHC9Q9Y397 364 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 MRPL42Q9Y6G3 142 aaKnown RBP10.19□□□□□ -0.78
HMGN1-202ENST00000380747 LOXHD1Q8IVV2 1947 aa10.19□□□□□ -0.78
HMGN1-202ENST00000380747 CFAP54Q96N23 3096 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 B4GALT5O43286 388 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 HOXA2O43364 376 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 EOMESO95936 686 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 PRKCBP05771 671 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms