RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 NOTUMQ6P988 496 aa20.6■□□□□ 0.89
SMN2-202ENST00000380742 ZPBP2Q6X784 338 aa20.6■□□□□ 0.89
SMN2-202ENST00000380742 SYCP3Q8IZU3 236 aa20.6■□□□□ 0.89
SMN2-202ENST00000380742 ADSSL1Q8N142 457 aa20.6■□□□□ 0.89
SMN2-202ENST00000380742 ZBTB45Q96K62 511 aaPredicted RBP20.6■□□□□ 0.89
SMN2-202ENST00000380742 ADAM2Q99965 735 aa20.6■□□□□ 0.89
SMN2-202ENST00000380742 EXOC7Q9UPT5 735 aa20.6■□□□□ 0.89
SMN2-202ENST00000380742 TNFSF13BQ9Y275 285 aa20.6■□□□□ 0.89
SMN2-202ENST00000380742 ABLIM1O14639 778 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 PROZP22891 400 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 MAGEA10P43363 369 aaPredicted RBP20.59■□□□□ 0.89
SMN2-202ENST00000380742 LIG4P49917 911 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 TMEM132AQ24JP5 1023 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 DPCR1Q3MIW9 517 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 UBXN11Q5T124 520 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 FTHL17Q9BXU8 183 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 HAPLN2Q9GZV7 340 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 KCTD10Q9H3F6 313 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 SYCE3A1L190 88 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 H0YGN5 161 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 N4BP3O15049 544 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 TOM1L1O75674 476 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 LETM1O95202 739 aaPredicted RBP20.59■□□□□ 0.89
SMN2-202ENST00000380742 KIF20AO95235 890 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 ZSCAN20P17040 1043 aaPredicted RBP20.59■□□□□ 0.89
SMN2-202ENST00000380742 ZSCAN23Q3MJ62 389 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 TWF2Q6IBS0 349 aaKnown RBP20.59■□□□□ 0.89
SMN2-202ENST00000380742 SASS6Q6UVJ0 657 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 ZNF365Q70YC5 407 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 GBP3Q9H0R5 595 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 SEMA6BQ9H3T3 888 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 RGS18Q9NS28 235 aa20.59■□□□□ 0.89
SMN2-202ENST00000380742 TTC3P53804 2025 aa20.58■□□□□ 0.89
SMN2-202ENST00000380742 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.58■□□□□ 0.88
SMN2-202ENST00000380742 ENPP3O14638 875 aa20.58■□□□□ 0.88
SMN2-202ENST00000380742 ADSSP30520 456 aa20.58■□□□□ 0.88
SMN2-202ENST00000380742 IKBKEQ14164 716 aa20.58■□□□□ 0.88
SMN2-202ENST00000380742 TMEM240Q5SV17 173 aa20.58■□□□□ 0.88
SMN2-202ENST00000380742 SLC27A1Q6PCB7 646 aa20.58■□□□□ 0.88
SMN2-202ENST00000380742 MPZL3Q6UWV2 235 aa20.58■□□□□ 0.88
SMN2-202ENST00000380742 ZBTB33Q86T24 672 aa20.58■□□□□ 0.88
SMN2-202ENST00000380742 MLKLQ8NB16 471 aa20.58■□□□□ 0.88
SMN2-202ENST00000380742 CCDC51Q96ER9 411 aa20.58■□□□□ 0.88
SMN2-202ENST00000380742 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.58■□□□□ 0.88
SMN2-202ENST00000380742 EIF2AQ9BY44 585 aaKnown RBP20.58■□□□□ 0.88
SMN2-202ENST00000380742 TSPYL2Q9H2G4 693 aaPredicted RBP20.58■□□□□ 0.88
SMN2-202ENST00000380742 ANKFY1Q9P2R3 1169 aa20.58■□□□□ 0.88
SMN2-202ENST00000380742 STYXL1Q9Y6J8 313 aa20.58■□□□□ 0.88
SMN2-202ENST00000380742 TRIP11Q15643 1979 aa20.57■□□□□ 0.88
SMN2-202ENST00000380742 NPTXRO95502 500 aa20.57■□□□□ 0.88
SMN2-202ENST00000380742 FGBP02675 491 aa20.57■□□□□ 0.88
SMN2-202ENST00000380742 MLLT1Q03111 559 aaPredicted RBP20.57■□□□□ 0.88
SMN2-202ENST00000380742 FAM43BQ6ZT52 329 aaPredicted RBP20.57■□□□□ 0.88
SMN2-202ENST00000380742 TCHPQ9BT92 498 aa20.57■□□□□ 0.88
SMN2-202ENST00000380742 CDT1Q9H211 546 aa20.57■□□□□ 0.88
SMN2-202ENST00000380742 TYW1Q9NV66 732 aaKnown RBP20.57■□□□□ 0.88
SMN2-202ENST00000380742 CITO14578 2027 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 ANK1P16157 1881 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 ABHD14A-ACY1A0A1B0GW23 586 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 C9IYK1 514 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 PDXKO00764 312 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 CLDN3O15551 220 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 ACTN1P12814 892 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 PPP1R2P41236 205 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 TYRO3Q06418 890 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 MCL1Q07820 350 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 STIM1Q13586 685 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 ZNF568Q3ZCX4 644 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 CENPPQ6IPU0 288 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 KLHL10Q6JEL2 608 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 PSRC1Q6PGN9 363 aaPredicted RBP20.56■□□□□ 0.88
SMN2-202ENST00000380742 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.56■□□□□ 0.88
SMN2-202ENST00000380742 OTOP2Q7RTS6 562 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 DHTKD1Q96HY7 919 aaPredicted RBP20.56■□□□□ 0.88
SMN2-202ENST00000380742 FUCA2Q9BTY2 467 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 TRAIPQ9BWF2 469 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 AGPAT3Q9NRZ7 376 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 FAM105AQ9NUU6 356 aa20.56■□□□□ 0.88
SMN2-202ENST00000380742 A0A0B4J269 797 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 TRIM49BA6NDI0 452 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 PSMA7O14818 248 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 CLIC2O15247 247 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 MATR3P43243 847 aaKnown RBP eCLIP20.55■□□□□ 0.88
SMN2-202ENST00000380742 PMS1P54277 932 aaKnown RBP20.55■□□□□ 0.88
SMN2-202ENST00000380742 NOLC1Q14978 699 aaKnown RBP eCLIP20.55■□□□□ 0.88
SMN2-202ENST00000380742 STX1AQ16623 288 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 ZCWPW2Q504Y3 356 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 SLFN12LQ6IEE8 588 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 SLC24A5Q71RS6 500 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 HS2ST1Q7LGA3 356 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 SMG8Q8ND04 991 aaKnown RBP20.55■□□□□ 0.88
SMN2-202ENST00000380742 POMGNT1Q8WZA1 660 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 P2RX5Q93086 422 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 GDF15Q99988 308 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 ADPGKQ9BRR6 497 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 CBWD1Q9BRT8 395 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 GZF1Q9H116 711 aaPredicted RBP20.55■□□□□ 0.88
SMN2-202ENST00000380742 C1orf112Q9NSG2 853 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 CTNND2Q9UQB3 1225 aa20.55■□□□□ 0.88
SMN2-202ENST00000380742 TRAF3IP3Q9Y228 551 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms