RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 CAVIN1Q6NZI2 390 aaKnown RBP13.9□□□□□ -0.19
SMN1-202ENST00000380707 NOTUMQ6P988 496 aa13.9□□□□□ -0.19
SMN1-202ENST00000380707 HVCN1Q96D96 273 aa13.9□□□□□ -0.19
SMN1-202ENST00000380707 ACCSQ96QU6 501 aa13.9□□□□□ -0.19
SMN1-202ENST00000380707 PDZD7Q9H5P4 517 aa13.9□□□□□ -0.19
SMN1-202ENST00000380707 PTPRHQ9HD43 1115 aa13.9□□□□□ -0.19
SMN1-202ENST00000380707 RGS18Q9NS28 235 aa13.9□□□□□ -0.19
SMN1-202ENST00000380707 CXXC1Q9P0U4 656 aaPredicted RBP13.9□□□□□ -0.19
SMN1-202ENST00000380707 MAPK8IP1Q9UQF2 711 aa13.9□□□□□ -0.19
SMN1-202ENST00000380707 ABHD14A-ACY1A0A1B0GW23 586 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 TISP43B9A030 160 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 HNRNPDLO14979 420 aaKnown RBP13.89□□□□□ -0.19
SMN1-202ENST00000380707 PIGRP01833 764 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 ACTN1P12814 892 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 BMT2Q1RMZ1 405 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 TMEM132AQ24JP5 1023 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 C9orf50Q5SZB4 431 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 UBXN11Q5T124 520 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 ZNF658Q5TYW1 1059 aaPredicted RBP13.89□□□□□ -0.19
SMN1-202ENST00000380707 EEF1DP3Q658K8 133 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 SLC39A4Q6P5W5 647 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 ZPBP2Q6X784 338 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMN1-202ENST00000380707 RBM43Q6ZSC3 357 aaKnown RBP13.89□□□□□ -0.19
SMN1-202ENST00000380707 STXBP4Q6ZWJ1 553 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 NELFCDQ8IXH7 590 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 HERVK_113Q902F9 699 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 BICD1Q96G01 975 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 ZBTB45Q96K62 511 aaPredicted RBP13.89□□□□□ -0.19
SMN1-202ENST00000380707 EIF2AQ9BY44 585 aaKnown RBP13.89□□□□□ -0.19
SMN1-202ENST00000380707 UBE2OQ9C0C9 1292 aaKnown RBP13.89□□□□□ -0.19
SMN1-202ENST00000380707 TNFSF13BQ9Y275 285 aa13.89□□□□□ -0.19
SMN1-202ENST00000380707 ZMYM2Q9UBW7 1377 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 C9IYK1 514 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 ANKRD63C9JTQ0 380 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 ABLIM1O14639 778 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 TOM1L1O75674 476 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 BAIAP3O94812 1187 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 PROZP22891 400 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 PRCPP42785 496 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 LIG4P49917 911 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 WDR5P61964 334 aaKnown RBP13.88□□□□□ -0.19
SMN1-202ENST00000380707 SHHQ15465 462 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 SKOR2Q2VWA4 1001 aaPredicted RBP13.88□□□□□ -0.19
SMN1-202ENST00000380707 SLC27A1Q6PCB7 646 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 SLC24A5Q71RS6 500 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 MYOCDQ8IZQ8 938 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 SYCP3Q8IZU3 236 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 CCDC51Q96ER9 411 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 TRAIPQ9BWF2 469 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 HAPLN2Q9GZV7 340 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 TMEM206Q9H813 350 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 CDH23Q9H251 3354 aa13.88□□□□□ -0.19
SMN1-202ENST00000380707 CHD7Q9P2D1 2997 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 A0A0U1RQF3 1178 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 ZBBXA8MT70 800 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 N4BP3O15049 544 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 TGFB1I1O43294 461 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 NPTXRO95502 500 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 ADSSP30520 456 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 FAM189BP81408 668 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 DEFB103AP81534 67 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 KNOP1Q1ED39 458 aaKnown RBP13.87□□□□□ -0.19
SMN1-202ENST00000380707 RASIP1Q5U651 963 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 FAM43BQ6ZT52 329 aaPredicted RBP13.87□□□□□ -0.19
SMN1-202ENST00000380707 ZBTB33Q86T24 672 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 CRIPAKQ8N1N5 446 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 GUF1Q8N442 669 aaKnown RBP13.87□□□□□ -0.19
SMN1-202ENST00000380707 TCHPQ9BT92 498 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 FAM105AQ9NUU6 356 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 ANKFY1Q9P2R3 1169 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 EXOC7Q9UPT5 735 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 PCDHB2Q9Y5E7 798 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 UBE4BO95155 1302 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 MICAL3Q7RTP6 2002 aa13.87□□□□□ -0.19
SMN1-202ENST00000380707 CLDN3O15551 220 aa13.86□□□□□ -0.19
SMN1-202ENST00000380707 EFCAB14O75071 495 aa13.86□□□□□ -0.19
SMN1-202ENST00000380707 CD44P16070 742 aaKnown RBP13.86□□□□□ -0.19
SMN1-202ENST00000380707 IBSPP21815 317 aaPredicted RBP13.86□□□□□ -0.19
SMN1-202ENST00000380707 BMP8BP34820 402 aa13.86□□□□□ -0.19
SMN1-202ENST00000380707 MCL1Q07820 350 aa13.86□□□□□ -0.19
SMN1-202ENST00000380707 COBLL1Q53SF7 1204 aa13.86□□□□□ -0.19
SMN1-202ENST00000380707 MPZL3Q6UWV2 235 aa13.86□□□□□ -0.19
SMN1-202ENST00000380707 TMCO2Q7Z6W1 182 aaPredicted RBP13.86□□□□□ -0.19
SMN1-202ENST00000380707 TRIML1Q8N9V2 468 aa13.86□□□□□ -0.19
SMN1-202ENST00000380707 SMG8Q8ND04 991 aaKnown RBP13.86□□□□□ -0.19
SMN1-202ENST00000380707 SYAP1Q96A49 352 aaPredicted RBP13.86□□□□□ -0.19
SMN1-202ENST00000380707 GTPBP4Q9BZE4 634 aaKnown RBP13.86□□□□□ -0.19
SMN1-202ENST00000380707 GBP3Q9H0R5 595 aa13.86□□□□□ -0.19
SMN1-202ENST00000380707 CDT1Q9H211 546 aa13.86□□□□□ -0.19
SMN1-202ENST00000380707 KCTD10Q9H3F6 313 aa13.86□□□□□ -0.19
SMN1-202ENST00000380707 C1orf112Q9NSG2 853 aa13.86□□□□□ -0.19
SMN1-202ENST00000380707 HES2Q9Y543 173 aa13.86□□□□□ -0.19
SMN1-202ENST00000380707 STYXL1Q9Y6J8 313 aa13.86□□□□□ -0.19
SMN1-202ENST00000380707 SZT2Q5T011 3432 aa13.86□□□□□ -0.19
SMN1-202ENST00000380707 A0A0B4J269 797 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 PPP1R3GB7ZBB8 358 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 ZNF623O75123 536 aa13.85□□□□□ -0.19
SMN1-202ENST00000380707 ATF7P17544 494 aaPredicted RBP13.85□□□□□ -0.19
SMN1-202ENST00000380707 KCNJ6P48051 423 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms