RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TAP1Q03518 808 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 MKRN3Q13064 507 aaKnown RBP17.05■□□□□ 0.32
COL2A1-202ENST00000380518 DRP2Q13474 957 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 CDKL3Q8IVW4 592 aaPredicted RBP17.05■□□□□ 0.32
COL2A1-202ENST00000380518 KIF2CQ99661 725 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 CENPKQ9BS16 269 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 EPC1Q9H2F5 836 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 TUFT1Q9NNX1 390 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
COL2A1-202ENST00000380518 MLXIPLQ9NP71 852 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 FBXL5Q9UKA1 691 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 AGO2Q9UKV8 859 aaKnown RBP17.05■□□□□ 0.32
COL2A1-202ENST00000380518 ARFIP2P53365 341 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 MTF1Q14872 753 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 MORF4L2Q15014 288 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 ZBED8Q8IZ13 594 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 RNPC3Q96LT9 517 aaKnown RBP17.05■□□□□ 0.32
COL2A1-202ENST00000380518 PLA2G12BQ9BX93 195 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 MRPL40Q9NQ50 206 aaKnown RBP17.05■□□□□ 0.32
COL2A1-202ENST00000380518 SNX12Q9UMY4 172 aa17.05■□□□□ 0.32
COL2A1-202ENST00000380518 DUOXA2Q1HG44 320 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 SCN4BQ8IWT1 228 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 DPF2Q92785 391 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 TGS1Q96RS0 853 aaKnown RBP17.04■□□□□ 0.32
COL2A1-202ENST00000380518 ASAP2O43150 1006 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 ROR1Q01973 937 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 IZUMO3Q5VZ72 239 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 NOP9Q86U38 636 aaKnown RBP17.04■□□□□ 0.32
COL2A1-202ENST00000380518 ADSSL1Q8N142 457 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.04■□□□□ 0.32
COL2A1-202ENST00000380518 ACAP3Q96P50 834 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 AGPAT1Q99943 283 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 GTSE1Q9NYZ3 720 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.04■□□□□ 0.32
COL2A1-202ENST00000380518 NSUN4Q96CB9 384 aaKnown RBP17.04■□□□□ 0.32
COL2A1-202ENST00000380518 PARVAQ9NVD7 372 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 DCTN4Q9UJW0 460 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 SLC13A4Q9UKG4 626 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 SLC16A3O15427 465 aaKnown RBP17.04■□□□□ 0.32
COL2A1-202ENST00000380518 NOP14P78316 857 aaKnown RBP17.04■□□□□ 0.32
COL2A1-202ENST00000380518 FAM102AQ5T9C2 384 aaPredicted RBP17.04■□□□□ 0.32
COL2A1-202ENST00000380518 ITPRIPL1Q6GPH6 555 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 FRA10AC1Q70Z53 315 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 ZC3H18Q86VM9 953 aaKnown RBP17.04■□□□□ 0.32
COL2A1-202ENST00000380518 TTC8Q8TAM2 541 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 PHF20Q9BVI0 1012 aa17.04■□□□□ 0.32
COL2A1-202ENST00000380518 MORC2Q9Y6X9 1032 aaPredicted RBP17.04■□□□□ 0.32
COL2A1-202ENST00000380518 CREB3O43889 395 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 SNX2O60749 519 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 CCNYL1Q8N7R7 359 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 ABCF3Q9NUQ8 709 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 LAMC1P11047 1609 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 SSU72P8A0A1W2PR75 194 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 EFHC2Q5JST6 749 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 C1orf146Q5VVC0 180 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 GRAMD1AQ96CP6 724 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 IFT43Q96FT9 208 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 AMACRQ9UHK6 382 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 SLC18A3Q16572 532 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 KIAA1755Q5JYT7 1200 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 L3MBTL1Q9Y468 752 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 KIAA0391O15091 583 aaKnown RBP17.03■□□□□ 0.32
COL2A1-202ENST00000380518 EEF1DP29692 281 aaKnown RBP17.03■□□□□ 0.32
COL2A1-202ENST00000380518 RECQLP46063 649 aaPredicted RBP17.03■□□□□ 0.32
COL2A1-202ENST00000380518 TEDDM1Q5T9Z0 273 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 LDHDQ86WU2 507 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 SP8Q8IXZ3 490 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 C1orf54Q8WWF1 131 aa17.03■□□□□ 0.32
COL2A1-202ENST00000380518 OLA1Q9NTK5 396 aaKnown RBP17.03■□□□□ 0.32
COL2A1-202ENST00000380518 FAM217BQ9NTX9 383 aaPredicted RBP17.03■□□□□ 0.32
COL2A1-202ENST00000380518 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
COL2A1-202ENST00000380518 ZFXP17010 805 aaPredicted RBP17.02■□□□□ 0.32
COL2A1-202ENST00000380518 SLC1A1P43005 524 aa17.02■□□□□ 0.32
COL2A1-202ENST00000380518 EFNA5P52803 228 aa17.02■□□□□ 0.32
COL2A1-202ENST00000380518 NUDCD3Q8IVD9 361 aa17.02■□□□□ 0.32
COL2A1-202ENST00000380518 TIPINQ9BVW5 301 aa17.02■□□□□ 0.32
COL2A1-202ENST00000380518 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.02■□□□□ 0.32
COL2A1-202ENST00000380518 USP31Q70CQ4 1352 aa17.02■□□□□ 0.32
COL2A1-202ENST00000380518 RTN2O75298 545 aa17.02■□□□□ 0.32
COL2A1-202ENST00000380518 SRGNP10124 158 aa17.02■□□□□ 0.32
COL2A1-202ENST00000380518 VSNL1P62760 191 aa17.02■□□□□ 0.32
COL2A1-202ENST00000380518 CDR2Q01850 454 aa17.02■□□□□ 0.32
COL2A1-202ENST00000380518 SENP1Q9P0U3 644 aa17.02■□□□□ 0.32
COL2A1-202ENST00000380518 ITIH6Q6UXX5 1313 aa17.02■□□□□ 0.32
COL2A1-202ENST00000380518 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.31
COL2A1-202ENST00000380518 OVOS2A0A0G2JMS6 1433 aa17.02■□□□□ 0.31
COL2A1-202ENST00000380518 OVOS2A0A0J9YW53 1432 aa17.02■□□□□ 0.31
COL2A1-202ENST00000380518 OVOS2Q6IE36 1432 aa17.02■□□□□ 0.31
COL2A1-202ENST00000380518 FOXP2O15409 715 aa17.02■□□□□ 0.31
COL2A1-202ENST00000380518 IGDCC4Q8TDY8 1250 aa17.02■□□□□ 0.31
COL2A1-202ENST00000380518 SMYD3Q9H7B4 428 aa17.02■□□□□ 0.31
COL2A1-202ENST00000380518 ETNK1Q9HBU6 452 aa17.02■□□□□ 0.31
COL2A1-202ENST00000380518 PRKAG2Q9UGJ0 569 aa17.02■□□□□ 0.31
COL2A1-202ENST00000380518 NMT1P30419 496 aaKnown RBP17.02■□□□□ 0.31
COL2A1-202ENST00000380518 ALKBH8Q96BT7 664 aaKnown RBP17.02■□□□□ 0.31
COL2A1-202ENST00000380518 C7orf25Q9BPX7 421 aa17.02■□□□□ 0.31
COL2A1-202ENST00000380518 HPCAL4Q9UM19 191 aa17.02■□□□□ 0.31
COL2A1-202ENST00000380518 RHOBTB3O94955 611 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 SCP2P22307 547 aa17.01■□□□□ 0.31
COL2A1-202ENST00000380518 ZBTB17Q13105 803 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms