RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 ADGRL3Q9HAR2 1447 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 RAD51CO43502 376 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 OSBPP22059 807 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 ARSEP51690 589 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 KYNUQ16719 465 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 TXNRD1Q16881 649 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 ANKRD40Q6AI12 368 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 PI16Q6UXB8 463 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 NLRP10Q86W26 655 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 UVRAGQ9P2Y5 699 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 ZHX2Q9Y6X8 837 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 PALLDQ8WX93 1383 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 TYW5A2RUC4 315 aaKnown RBP18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 SNX2O60749 519 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 POLD1P28340 1107 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 IFNA8P32881 189 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 MRPL28Q13084 256 aaKnown RBP18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 CYFIP1Q7L576 1253 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 USP38Q8NB14 1042 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 RAPGEF5Q92565 580 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 DACH2Q96NX9 599 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 KLHL8Q9P2G9 620 aaPredicted RBP18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 CLEC11AQ9Y240 323 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 KIF1BO60333 1816 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 CDHR2Q9BYE9 1310 aa18.1■□□□□ 0.49
COL4A3BP-203ENST00000380494 O00370 1275 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 SERPINB9P50453 376 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 EXOSC10Q01780 885 aaKnown RBP18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 NAB2Q15742 525 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 TMC4Q7Z404 712 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 SEPT8Q92599 483 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 SLC13A1Q9BZW2 595 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 PARVAQ9NVD7 372 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 SERPINB13Q9UIV8 391 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 KRT16P08779 473 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 LONRF1Q17RB8 773 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 TRIM60Q495X7 471 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 FAM160B2Q86V87 743 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 REXO1L1PQ8IX06 675 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 RCOR2Q8IZ40 523 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 SYN2Q92777 582 aaPredicted RBP18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 TRPM1Q7Z4N2 1603 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 UBE4BO95155 1302 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 ARHGEF37A1IGU5 675 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 POTEMA6NI47 508 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 MCAMP43121 646 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 UBXN2AP68543 259 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 C4orf50Q6ZRC1 276 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 LZICQ8WZA0 190 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 CPSF3Q9UKF6 684 aaKnown RBP18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 GJA3Q9Y6H8 435 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 PBRM1Q86U86 1689 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 TMEM247A6NEH6 219 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 SERPINI2O75830 405 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 HSPA1AP0DMV8 641 aaKnown RBP18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 HSPA1BP0DMV9 641 aaKnown RBP18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 RASGRF1Q13972 1273 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 USP6P35125 1406 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 ERVV-1B6SEH8 477 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 GLYCTKQ8IVS8 523 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 MAGEB5Q9BZ81 275 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 COG4Q9H9E3 785 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 SLC13A4Q9UKG4 626 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 ATP11BQ9Y2G3 1177 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 TMEM2Q9UHN6 1383 aa18.09■□□□□ 0.49
COL4A3BP-203ENST00000380494 TMEM120BA0PK00 339 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 INO80B-WBP1J3KQ70 363 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 SPAG6O75602 509 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 GHRP10912 638 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 NIM1KQ8IY84 436 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 TERB1Q8NA31 727 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 SERPINB12Q96P63 405 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 C11orf70Q9BRQ4 267 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 TRIM51Q9BSJ1 452 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 INO80BQ9C086 356 aaPredicted RBP18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 KIF9Q9HAQ2 790 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 PDXKO00764 312 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 SORBS3O60504 671 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 SCTRP47872 440 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 GCLMP48507 274 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 FXR1P51114 621 aaKnown RBP eCLIP18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 SUGP1Q8IWZ8 645 aaKnown RBP18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 BARHL2Q9NY43 387 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 CPDO75976 1380 aa18.08■□□□□ 0.49
COL4A3BP-203ENST00000380494 SRGAP2CP0DJJ0 459 aa18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 CDK8P49336 464 aa18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 ZNF667Q5HYK9 610 aa18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 MTHFD1LQ6UB35 978 aa18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 SETD3Q86TU7 594 aaPredicted RBP18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 MYCBPAPQ8TBZ2 947 aa18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 HIC2Q96JB3 615 aa18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 HNRNPRO43390 633 aaKnown RBP18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 USP17L8P0C7I0 530 aa18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 DEFA1P59665 94 aa18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 DEFA3P59666 94 aa18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 ABCE1P61221 599 aaKnown RBP18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 CDO1Q16878 200 aa18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 ITPRIPL1Q6GPH6 555 aa18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 FRA10AC1Q70Z53 315 aa18.08■□□□□ 0.48
COL4A3BP-203ENST00000380494 C8orf37Q96NL8 207 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms